Os01g0930800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 1 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0930800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycoside hydrolase, family 1 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.66 | 0.464 | 12 | -0.381 | 0.895 | 1.45 | -0.257 | 1.69 | -0.181 | 20.3 | 14.77 | 956 | -- | -- |
| 99.92 | 0.466 | 12 | -0.709 | 0.944 | 1.44 | 0.0318 | -- | -0.274 | 20.3 | 1.523 | 1030 | -- | -- |
| 97.72 | 0.46 | 12 | -0.447 | 0.913 | 1.34 | -- | 1.26 | -0.203 | 20.3 | 16.31 | 981 | -- | -- |
| 99.24 | 0.464 | 12 | -0.7 | 0.903 | 1.32 | -- | -- | -0.271 | 20.3 | 16.9 | 971 | -- | -- |
| 124.93 | 0.521 | 12 | -0.582 | -- | 1.98 | -- | 1.25 | -0.298 | -- | 16.5 | 702 | -- | -- |
| 130.62 | 0.536 | 12 | -0.295 | 1.12 | -- | 0.168 | -- | -0.0302 | 20.9 | -- | -- | -- | -- |
| 130.72 | 0.535 | 12 | -0.301 | 1.12 | -- | -- | -- | -0.0302 | 20.9 | -- | -- | -- | -- |
| 126.11 | 0.523 | 12 | -0.836 | -- | 1.99 | -- | -- | -0.371 | -- | 16.7 | 706 | -- | -- |
| 110.59 | 0.49 | 12 | -- | 0.945 | 1.03 | -- | -- | -0.152 | 20.4 | 17.37 | 967 | -- | -- |
| 202.06 | 0.664 | 12 | -0.301 | -- | -- | -- | -- | -0.038 | -- | -- | -- | -- | -- |
| 133.1 | 0.54 | 12 | -- | 1.12 | -- | -- | -- | 0.00327 | 20.9 | -- | -- | -- | -- |
| 142.45 | 0.556 | 12 | -- | -- | 1.69 | -- | -- | -0.238 | -- | 17.2 | 673 | -- | -- |
| 204.44 | 0.667 | 12 | -- | -- | -- | -- | -- | -0.00466 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 2 | 91.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 4 | 92.14 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 6 | 92.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 23 | 94.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 26 | 94.08 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 33 | 94.21 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 58 | 94.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 72 | 94.89 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 77 | 95.00 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 79 | 95.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 114 | 95.47 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 116 | 95.48 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 127 | 95.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 185 | 95.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 278 | 96.23 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 284 | 96.27 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 288 | 96.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 290 | 96.31 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 339 | 96.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 392 | 96.87 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 489 | 97.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 604 | 97.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 610 | 97.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 12 |
| 807 | 98.21 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 887 | 98.31 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |