Os01g0929600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0929600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.52 | 0.327 | 2.89 | -0.648 | 0.0666 | 1.34 | -0.192 | -10.6 | 0.0799 | 1.53 | 31 | 6 | -- | -- |
| 58.89 | 0.36 | 2.83 | -0.0466 | 0.0713 | 0.291 | -0.0786 | -- | 0.0765 | 2.67 | 31 | 6 | -- | -- |
| 48.53 | 0.324 | 2.89 | -0.64 | 0.0686 | 1.35 | -- | -10.7 | 0.0805 | 2.07 | 31.1 | 5 | -- | -- |
| 58.6 | 0.357 | 2.83 | -0.0509 | 0.0758 | 0.332 | -- | -- | 0.076 | 2.82 | 31.2 | 6 | -- | -- |
| 48.66 | 0.325 | 2.89 | -0.613 | -- | 1.34 | -- | -10.8 | 0.0812 | -- | 31.2 | 4 | -- | -- |
| 60.86 | 0.366 | 2.83 | -0.0254 | 0.0181 | -- | -0.163 | -- | 0.0572 | 1.15 | -- | -- | -- | -- |
| 60.97 | 0.366 | 2.83 | -0.0197 | 0.0188 | -- | -- | -- | 0.058 | 1.83 | -- | -- | -- | -- |
| 58.92 | 0.358 | 2.83 | -0.0402 | -- | 0.301 | -- | -- | 0.0779 | -- | 31.22 | 6 | -- | -- |
| 58.65 | 0.357 | 2.83 | -- | 0.0768 | 0.331 | -- | -- | 0.0828 | 3.2 | 31.22 | 6 | -- | -- |
| 60.99 | 0.365 | 2.83 | -0.0189 | -- | -- | -- | -- | 0.0584 | -- | -- | -- | -- | -- |
| 60.98 | 0.365 | 2.83 | -- | 0.0184 | -- | -- | -- | 0.0602 | 1.8 | -- | -- | -- | -- |
| 58.96 | 0.358 | 2.83 | -- | -- | 0.297 | -- | -- | 0.0821 | -- | 31.23 | 6 | -- | -- |
| 61 | 0.365 | 2.83 | -- | -- | -- | -- | -- | 0.0605 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.79 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 72 | 46.61 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 76 | 46.90 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 1 |
| 78 | 47.15 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 240 | 49.97 | temperature | 30 | 30 | > th | dose independent | sin | 7 | NA |
| 401 | 51.89 | temperature | 30 | 30 | < th | dose independent | sin | 7 | NA |
| 427 | 52.13 | temperature | 30 | 30 | < th | dose independent | rect. | 23 | 23 |
| 563 | 53.28 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 776 | 54.14 | temperature | 30 | 30 | > th | dose independent | no | NA | NA |
| 942 | 54.58 | temperature | 25 | 30 | > th | dose independent | rect. | 22 | 1 |
| 944 | 54.60 | wind | 9 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 945 | 54.60 | temperature | 10 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 948 | 54.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 952 | 54.60 | humidity | 50 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 962 | 54.60 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 963 | 54.60 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 983 | 54.60 | temperature | 10 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 986 | 54.60 | temperature | 20 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 987 | 54.60 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 1 |