Os01g0925300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os01g0925300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.54 | 0.518 | 3.47 | -0.066 | 0.327 | 0.404 | 0.34 | 1.59 | -0.0296 | 6 | 29.36 | 1243 | -- | -- |
| 121.74 | 0.514 | 3.49 | -0.291 | 0.343 | 0.555 | 0.185 | -- | -0.0307 | 6.21 | 31.99 | 1293 | -- | -- |
| 121.81 | 0.514 | 3.48 | -0.116 | 0.327 | 0.441 | -- | 1.26 | -0.0421 | 5.98 | 28.76 | 1240 | -- | -- |
| 121.82 | 0.514 | 3.5 | -0.337 | 0.331 | 0.582 | -- | -- | -0.0308 | 6 | 31.91 | 1290 | -- | -- |
| 127.34 | 0.526 | 3.49 | -0.0826 | -- | 0.464 | -- | 1.35 | -0.0422 | -- | 28.42 | 1260 | -- | -- |
| 137.81 | 0.55 | 3.53 | -0.191 | 0.368 | -- | 0.509 | -- | -0.136 | 5.09 | -- | -- | -- | -- |
| 138.45 | 0.551 | 3.53 | -0.191 | 0.372 | -- | -- | -- | -0.139 | 5.24 | -- | -- | -- | -- |
| 127.5 | 0.526 | 3.51 | -0.332 | -- | 0.602 | -- | -- | -0.0192 | -- | 31.9 | 1293 | -- | -- |
| 124.7 | 0.52 | 3.5 | -- | 0.33 | 0.537 | -- | -- | -0.00397 | 5.99 | 32.21 | 1287 | -- | -- |
| 145.7 | 0.564 | 3.53 | -0.178 | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
| 139.41 | 0.552 | 3.52 | -- | 0.369 | -- | -- | -- | -0.117 | 5.25 | -- | -- | -- | -- |
| 130.3 | 0.532 | 3.5 | -- | -- | 0.558 | -- | -- | 0.00572 | -- | 32.19 | 1290 | -- | -- |
| 146.53 | 0.565 | 3.53 | -- | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 3 | 119.62 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 4 | 119.74 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 6 | 119.75 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 9 | 119.83 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 23 | 119.91 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 39 | 119.98 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 66 | 120.46 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 68 | 120.64 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 93 | 121.26 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 111 | 121.32 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 112 | 121.40 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 119 | 121.46 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 209 | 121.76 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 261 | 122.03 | radiation | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 268 | 122.08 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 308 | 122.26 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 13 |
| 349 | 122.31 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 367 | 122.34 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 382 | 122.36 | humidity | 60 | 1440 | < th | dose independent | sin | 14 | NA |
| 392 | 122.39 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 401 | 122.39 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 12 |
| 406 | 122.40 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 3 |
| 407 | 122.40 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 415 | 122.40 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 10 |
| 421 | 122.40 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 14 |
| 424 | 122.40 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 482 | 122.46 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 484 | 122.47 | humidity | 70 | 1440 | < th | dose dependent | sin | 13 | NA |
| 511 | 122.53 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 616 | 122.54 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 10 |
| 617 | 122.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 621 | 122.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 629 | 122.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 630 | 122.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 631 | 122.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 633 | 122.58 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 634 | 122.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 643 | 122.59 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 662 | 122.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 663 | 122.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 12 |
| 667 | 122.63 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 679 | 122.64 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 723 | 122.72 | humidity | 60 | 1440 | > th | dose independent | sin | 14 | NA |
| 800 | 122.84 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 972 | 123.05 | wind | 7 | 43200 | > th | dose dependent | sin | 5 | NA |