Os01g0924600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0924600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.54 | 0.223 | 11.4 | 1.32 | 0.364 | 0.668 | -0.047 | -0.0325 | 0.276 | 21.1 | 0.4596 | 1361 | -- | -- |
| 22.51 | 0.221 | 11.4 | 1.32 | 0.378 | 0.688 | -0.0407 | -- | 0.276 | 21.2 | 0.43 | 1353 | -- | -- |
| 22.52 | 0.221 | 11.4 | 1.32 | 0.381 | 0.699 | -- | 0.0403 | 0.275 | 21.2 | 0.43 | 1353 | -- | -- |
| 22.52 | 0.221 | 11.4 | 1.32 | 0.379 | 0.688 | -- | -- | 0.276 | 21.1 | 0.4329 | 1353 | -- | -- |
| 26.29 | 0.239 | 11.4 | 1.35 | -- | 0.658 | -- | -0.179 | 0.298 | -- | 0.5517 | 1493 | -- | -- |
| 26.97 | 0.243 | 11.4 | 1.16 | 0.262 | -- | -0.0632 | -- | 0.203 | 20.4 | -- | -- | -- | -- |
| 26.98 | 0.243 | 11.4 | 1.16 | 0.262 | -- | -- | -- | 0.203 | 20.3 | -- | -- | -- | -- |
| 26.29 | 0.239 | 11.4 | 1.31 | -- | 0.662 | -- | -- | 0.285 | -- | 0.4669 | 1489 | -- | -- |
| 61.42 | 0.365 | 11.4 | -- | 0.256 | 0.189 | -- | -- | 0.136 | 21.1 | 29.98 | 8673 | -- | -- |
| 30.8 | 0.259 | 11.4 | 1.16 | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
| 62.45 | 0.37 | 11.4 | -- | 0.258 | -- | -- | -- | 0.0736 | 20.7 | -- | -- | -- | -- |
| 62.99 | 0.37 | 11.4 | -- | -- | -0.329 | -- | -- | 0.0376 | -- | 17.33 | 971 | -- | -- |
| 66.2 | 0.38 | 11.4 | -- | -- | -- | -- | -- | 0.0715 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.60 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 6 | 22.61 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 9 | 22.62 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 17 | 22.65 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 18 | 22.65 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 6 | 6 |
| 20 | 22.66 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 26 | 22.67 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 45 | 22.69 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 55 | 22.70 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 62 | 22.70 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 63 | 22.70 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 144 | 22.75 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 166 | 22.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 185 | 22.77 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 200 | 22.77 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 0 | NA |
| 213 | 22.78 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 4 | NA |
| 225 | 22.78 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 256 | 22.79 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 308 | 22.81 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 4 | NA |
| 394 | 22.83 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 540 | 22.86 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 637 | 22.87 | atmosphere | 1010 | 43200 | < th | dose dependent | no | NA | NA |
| 638 | 22.87 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 665 | 22.87 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 748 | 22.89 | atmosphere | 1005 | 43200 | < th | dose independent | no | NA | NA |
| 861 | 22.90 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 21 |
| 986 | 22.92 | atmosphere | 1005 | 43200 | > th | dose independent | no | NA | NA |
| 1000 | 22.92 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 16 |