FiT-DB / Search/ Help/ Sample detail

Os01g0924200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.31 (0.0408) R2 : 0.682
β1 : -1.71 (0.149) R2dD : 0.0953 R2D : 0.0889
β2 : 2.92 (0.101) R2dC : 0.592 R2C : 0.589
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.204 (0.087) R2dN8 : 0.00516 R2N8 : -0.00773
σ : 0.767
deviance : 268.15
__
_____
C
peak time of C : 9.23
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
244.11 0.734 7.34 -1.68 2.3 0.815 -1.46 1.49 -0.246 8.15 1.75 37 -- --
252.15 0.74 7.33 -1.74 2.29 0.829 -0.158 -- -0.24 8.14 1.8 36 -- --
248.62 0.734 7.32 -1.69 2.22 0.83 -- 1.02 -0.257 8.14 1.73 39 -- --
251.97 0.739 7.34 -1.75 2.25 0.865 -- -- -0.256 8.1 1.738 36 -- --
431.08 0.972 7.41 -1.67 -- 1.71 -- 0.47 -0.293 -- 2.84 15 -- --
267.84 0.767 7.31 -1.72 2.92 -- 0.295 -- -0.205 9.25 -- -- -- --
268.15 0.767 7.31 -1.71 2.92 -- -- -- -0.204 9.23 -- -- -- --
432.52 0.973 7.41 -1.67 -- 1.72 -- -- -0.294 -- 2.84 15 -- --
331.38 0.848 7.3 -- 2.29 0.806 -- -- -0.0643 8.24 1.8 39 -- --
763.78 1.29 7.39 -1.72 -- -- -- -- -0.191 -- -- -- -- --
345.41 0.869 7.27 -- 2.92 -- -- -- -0.0138 9.28 -- -- -- --
505.21 1.05 7.37 -- -- 1.73 -- -- -0.107 -- 2.722 11 -- --
842.13 1.35 7.35 -- -- -- -- -- 0.000417 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 231.82 temperature 15.0 270 > th dose independent rect. 18 13
2 236.85 temperature 15.0 720 > th dose independent rect. 18 6
6 238.12 temperature 15.0 720 > th dose independent rect. 19 3
8 238.12 atmosphere 1015.0 720 < th dose dependent rect. 19 3
9 238.35 atmosphere 1005.0 720 > th dose independent rect. 15 10
10 238.35 atmosphere 1005.0 720 > th dose independent rect. 15 12
13 238.68 wind 3.0 720 < th dose independent rect. 18 4
14 238.79 humidity 90.0 10 < th dose independent rect. 2 7
16 238.85 wind 3.0 720 < th dose independent rect. 11 11
17 238.89 atmosphere 995.0 720 > th dose dependent rect. 16 3
21 239.19 atmosphere 1000.0 270 > th dose dependent rect. 23 4
28 239.54 atmosphere 1005.0 720 > th dose independent rect. 16 4
34 239.75 radiation 1.0 30 > th dose independent sin 3 NA
40 240.00 temperature 15.0 270 > th dose independent rect. 7 11
43 240.09 radiation 1.0 30 < th dose independent sin 4 NA
51 240.32 atmosphere 1005.0 270 > th dose independent rect. 23 4
57 240.56 precipitation 0.1 270 < th dose independent rect. 18 13
58 240.56 temperature 15.0 10 > th dose independent rect. 19 14
59 240.56 precipitation 0.1 270 < th dose dependent rect. 18 13
64 240.67 wind 3.0 720 < th dose independent rect. 15 7
76 241.08 radiation 1.0 30 > th dose independent rect. 5 11
94 241.18 temperature 15.0 720 > th dose independent rect. 12 10
103 241.34 atmosphere 1005.0 720 > th dose independent sin 16 NA
104 241.44 wind 9.0 720 < th dose dependent rect. 19 3
114 241.63 atmosphere 1015.0 270 < th dose dependent rect. 18 13
118 241.86 atmosphere 995.0 270 > th dose dependent rect. 14 13
119 241.86 atmosphere 995.0 90 > th dose dependent rect. 16 13
127 242.09 radiation 20.0 270 < th dose independent rect. 18 13
132 242.29 atmosphere 1000.0 10 > th dose dependent rect. 24 6
151 242.48 wind 9.0 720 < th dose independent rect. 19 20
171 242.75 atmosphere 1015.0 270 < th dose independent rect. 7 11
172 242.75 wind 9.0 270 < th dose independent rect. 18 13
174 242.75 humidity 50.0 270 > th dose independent rect. 18 13
182 242.86 atmosphere 1005.0 90 > th dose independent rect. 3 4
186 242.87 radiation 1.0 30 < th dose independent rect. 24 8
196 242.93 precipitation 0.1 720 < th dose independent rect. 3 4
199 242.93 precipitation 0.1 720 < th dose dependent rect. 3 4
207 243.01 humidity 90.0 10 > th dose independent rect. 2 7
208 243.03 atmosphere 995.0 270 > th dose independent rect. 18 13
209 243.04 precipitation 0.1 270 < th dose independent rect. 7 11
210 243.04 precipitation 0.1 270 < th dose dependent rect. 7 11
212 243.05 atmosphere 1005.0 270 > th dose independent rect. 3 1
215 243.07 radiation 1.0 90 < th dose dependent sin 6 NA
217 243.10 temperature 15.0 1440 > th dose independent rect. 6 11
222 243.15 radiation 1.0 30 < th dose independent rect. 2 6
241 243.37 wind 7.0 720 < th dose independent rect. 3 13
246 243.42 radiation 40.0 270 < th dose dependent rect. 18 13
251 243.47 precipitation 0.1 720 < th dose independent rect. 3 12
252 243.47 precipitation 0.1 720 < th dose dependent rect. 3 12
255 243.49 atmosphere 1005.0 10 > th dose independent rect. 24 6
289 243.79 wind 5.0 720 < th dose dependent rect. 21 1
297 243.94 precipitation 0.1 720 < th dose independent rect. 19 20
298 243.94 precipitation 0.1 720 < th dose dependent rect. 19 20
314 244.05 wind 9.0 720 < th dose dependent rect. 12 10
329 244.19 atmosphere 995.0 270 > th dose independent rect. 7 11
330 244.23 wind 5.0 720 < th dose dependent rect. 11 11
334 244.29 wind 5.0 720 < th dose dependent rect. 10 13
349 244.46 wind 7.0 720 < th dose independent rect. 10 6
352 244.48 wind 9.0 720 < th dose independent rect. 4 9
369 244.63 humidity 90.0 270 < th dose independent rect. 8 10
380 244.72 wind 9.0 720 < th dose independent rect. 1 15
381 244.75 wind 7.0 720 < th dose independent rect. 3 4
382 244.76 wind 1.0 720 > th dose independent rect. 15 4
389 244.84 humidity 70.0 720 > th dose independent rect. 3 4
405 244.98 atmosphere 1000.0 90 > th dose dependent rect. 3 4
406 245.00 atmosphere 1000.0 270 > th dose dependent rect. 3 1
408 245.01 radiation 20.0 720 < th dose independent rect. 3 4
412 245.05 temperature 10.0 720 > th dose independent rect. 15 4
413 245.05 atmosphere 1015.0 720 < th dose independent rect. 15 4
415 245.05 temperature 10.0 720 > th dose independent rect. 19 20
420 245.08 precipitation 0.1 720 < th dose independent rect. 1 15
422 245.08 precipitation 0.1 720 < th dose dependent rect. 1 15
438 245.21 humidity 50.0 720 > th dose independent rect. 4 9
468 245.30 temperature 10.0 720 > th dose independent rect. 3 4
469 245.30 temperature 30.0 720 < th dose independent rect. 3 4
470 245.30 humidity 50.0 720 > th dose independent rect. 3 4
472 245.30 atmosphere 995.0 720 > th dose independent rect. 3 4
474 245.30 temperature 10.0 720 > th dose independent rect. 7 20
489 245.42 atmosphere 1005.0 270 > th dose independent sin 12 NA
497 245.49 atmosphere 1000.0 10 > th dose dependent rect. 2 4
504 245.55 precipitation 0.1 720 < th dose independent rect. 19 11
505 245.55 precipitation 0.1 720 < th dose dependent rect. 19 11
510 245.59 wind 9.0 4320 < th dose independent rect. 5 4
511 245.59 humidity 50.0 270 > th dose independent rect. 3 11
538 245.67 radiation 1.0 90 < th dose dependent rect. 23 20
546 245.69 radiation 10.0 30 < th dose dependent rect. 24 14
547 245.70 temperature 15.0 90 > th dose independent rect. 9 10
576 245.80 radiation 1.0 90 < th dose independent rect. 21 22
592 245.85 temperature 10.0 720 > th dose independent rect. 3 12
593 245.85 temperature 10.0 720 > th dose independent rect. 15 12
596 245.87 atmosphere 1010.0 720 < th dose independent rect. 19 3
599 245.88 wind 3.0 720 > th dose independent rect. 8 11
602 245.90 radiation 40.0 720 < th dose independent rect. 15 4
605 245.91 wind 9.0 720 < th dose independent rect. 4 18
628 245.99 wind 9.0 720 < th dose dependent rect. 10 13
631 246.00 wind 7.0 270 < th dose independent rect. 3 20
632 246.00 atmosphere 995.0 10 > th dose dependent rect. 16 14
642 246.05 temperature 15.0 720 > th dose independent rect. 4 18
648 246.06 precipitation 0.1 720 < th dose independent rect. 12 10
650 246.06 precipitation 0.1 720 < th dose dependent rect. 12 10
658 246.09 radiation 10.0 30 < th dose dependent rect. 24 9
660 246.11 temperature 15.0 270 > th dose independent rect. 13 14
697 246.20 atmosphere 1010.0 270 < th dose independent rect. 18 13
706 246.24 wind 9.0 720 < th dose dependent rect. 10 6
721 246.32 temperature 15.0 1440 > th dose independent rect. 7 16
727 246.37 precipitation 0.1 720 < th dose independent rect. 10 14
729 246.37 precipitation 0.1 720 < th dose dependent rect. 10 14
732 246.39 humidity 90.0 10 > th dose independent rect. 24 9
736 246.40 atmosphere 1015.0 270 < th dose independent rect. 3 20
737 246.40 precipitation 0.1 720 < th dose independent rect. 10 21
740 246.40 precipitation 0.1 720 < th dose dependent rect. 10 21
762 246.47 temperature 25.0 1440 < th dose independent rect. 20 1
765 246.47 wind 9.0 720 < th dose dependent rect. 11 4
769 246.49 humidity 90.0 10 > th dose independent rect. 2 4
782 246.51 temperature 30.0 270 < th dose independent rect. 7 10
791 246.54 temperature 15.0 720 > th dose independent rect. 10 6
793 246.54 radiation 10.0 720 < th dose independent rect. 20 10
798 246.56 temperature 25.0 10 < th dose independent rect. 2 4
824 246.64 wind 9.0 720 < th dose independent rect. 10 21
830 246.66 radiation 40.0 720 < th dose independent rect. 15 12
860 246.79 temperature 10.0 30 > th dose dependent rect. 5 19
862 246.80 atmosphere 995.0 720 > th dose independent rect. 16 11
865 246.80 radiation 1.0 90 < th dose dependent rect. 21 22
883 246.87 wind 9.0 4320 < th dose independent rect. 3 1
889 246.90 radiation 40.0 720 < th dose dependent rect. 3 4
892 246.91 atmosphere 1015.0 720 < th dose independent rect. 3 4
903 246.98 humidity 50.0 4320 > th dose independent rect. 5 5
916 247.02 temperature 25.0 1440 > th dose independent rect. 20 1
920 247.03 wind 9.0 720 < th dose independent rect. 20 10
922 247.03 wind 1.0 1440 < th dose dependent rect. 8 1
923 247.04 precipitation 0.1 720 < th dose independent rect. 4 9
925 247.04 precipitation 0.1 720 < th dose dependent rect. 4 9
932 247.07 precipitation 0.1 10 < th dose independent rect. 19 14
934 247.07 precipitation 0.1 10 < th dose dependent rect. 19 14
935 247.08 temperature 10.0 720 > th dose independent rect. 4 9
936 247.08 atmosphere 995.0 720 > th dose independent rect. 4 9
937 247.08 atmosphere 1015.0 720 < th dose independent rect. 4 9
947 247.11 humidity 90.0 10 < th dose independent rect. 20 13
950 247.11 precipitation 0.1 270 < th dose independent rect. 3 20
951 247.11 precipitation 0.1 270 < th dose dependent rect. 3 20
955 247.13 temperature 30.0 720 < th dose independent rect. 7 3
957 247.13 temperature 15.0 720 > th dose independent rect. 6 6
961 247.13 atmosphere 1000.0 30 > th dose dependent rect. 3 6
967 247.15 radiation 10.0 10 < th dose dependent rect. 2 12
970 247.16 wind 9.0 720 < th dose independent rect. 12 10
973 247.17 radiation 1.0 720 > th dose independent rect. 10 6
977 247.17 atmosphere 1015.0 270 < th dose independent rect. 3 12
979 247.18 wind 9.0 720 < th dose independent rect. 10 14
998 247.24 wind 1.0 43200 < th dose dependent rect. 16 2