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Os01g0922700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.09 (0.0508) R2 : 0.907
β1 : -2.65 (0.186) R2dD : 0.0438 R2D : 0.0348
β2 : 12.6 (0.204) R2dC : 1.86 R2C : 0.352
β3 : 7.43 (0.227) R2dE : 0.527 R2E : -1.01
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0885 (0.108) R2dN8 : 0.000163 R2N8 : -0.00342
σ : 0.948
deviance : 414.46
__
_____
C
peak time of C : 17
E
wheather : temperature
threshold : 7.571
memory length : 290
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20.9
open length of G : 7.08

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
410.45 0.952 9.1 -2.72 12.4 7.34 1.11 -0.413 0.0565 17 8.71 283 21 7.02
410.1 0.943 9.1 -2.64 12.5 7.42 1.19 -- 0.0949 17 7.692 288 20.9 7.07
412.35 0.946 9.09 -2.68 12.4 7.32 -- -0.779 0.0982 17 8.272 287 21 7.03
414.46 0.948 9.09 -2.65 12.6 7.43 -- -- 0.0885 17 7.571 290 20.9 7.08
4250.11 3.05 8.91 -2.48 -- 0.81 -- 0.718 0.0136 -- -15.96 5839 20.9 6.71
873.51 1.39 9.05 -2.26 8.12 -- 0.724 -- 0.245 18.4 -- -- -- --
874.8 1.39 9.04 -2.27 8.12 -- -- -- 0.248 18.4 -- -- -- --
1900.43 2.03 9.53 -3.78 -- 9.44 -- -- -1.08 -- -25.47 6513 11.1 1.55
599.2 1.14 9.02 -- 12.2 6.78 -- -- 0.386 17.1 6.425 285 21 7.07
4298.2 3.06 8.89 -2.48 -- -- -- -- 0.0747 -- -- -- -- --
1010.75 1.49 8.99 -- 8.15 -- -- -- 0.501 18.4 -- -- -- --
1968.31 2.07 9.31 -- -- 9.49 -- -- -0.826 -- -22.27 3582 11.1 2.46
4460.87 3.12 8.83 -- -- -- -- -- 0.35 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 415.50 temperature 10.0 270 > th dose dependent rect. 21 7
11 497.53 precipitation 0.1 270 < th dose independent rect. 4 17
12 497.53 precipitation 0.1 270 < th dose dependent rect. 4 17
17 506.42 atmosphere 1015.0 270 < th dose independent rect. 21 7
18 507.59 precipitation 0.1 270 < th dose independent rect. 3 8
19 507.59 precipitation 0.1 270 < th dose dependent rect. 3 8
20 509.07 wind 9.0 270 < th dose independent rect. 21 7
21 509.07 radiation 1.0 270 < th dose dependent rect. 21 7
22 509.10 temperature 10.0 270 > th dose independent rect. 21 7
23 509.10 temperature 30.0 270 < th dose independent rect. 21 7
24 509.10 humidity 50.0 270 > th dose independent rect. 21 7
27 509.10 atmosphere 995.0 270 > th dose independent rect. 21 7
28 509.10 radiation 1.0 270 < th dose independent rect. 21 7
33 509.10 temperature 10.0 270 > th dose independent rect. 4 17
39 510.34 wind 9.0 270 < th dose independent rect. 11 16
44 513.24 precipitation 0.1 270 < th dose independent rect. 21 7
45 513.24 precipitation 0.1 270 < th dose dependent rect. 21 7
48 514.15 wind 9.0 270 < th dose independent rect. 3 8
49 514.23 temperature 10.0 270 > th dose independent rect. 3 8
50 514.23 atmosphere 995.0 270 > th dose independent rect. 3 8
51 514.23 atmosphere 1015.0 270 < th dose independent rect. 3 8
52 514.23 temperature 10.0 270 > th dose independent rect. 11 16
54 515.61 atmosphere 1015.0 270 < th dose independent rect. 23 16
57 516.74 temperature 20.0 270 > th dose independent rect. 22 5
84 520.65 wind 9.0 270 < th dose independent rect. 4 17
88 522.44 radiation 40.0 270 < th dose independent rect. 14 9
90 522.53 humidity 50.0 270 > th dose independent rect. 23 16
100 524.60 humidity 50.0 270 > th dose independent rect. 3 8
102 525.74 wind 9.0 270 < th dose independent rect. 23 16
103 526.13 temperature 10.0 270 > th dose independent rect. 15 8
104 526.13 temperature 10.0 270 > th dose independent rect. 23 16
107 527.16 atmosphere 995.0 270 > th dose independent rect. 23 16
115 529.91 precipitation 0.1 270 < th dose independent rect. 17 16
116 529.91 precipitation 0.1 270 < th dose dependent rect. 17 16
118 530.25 wind 9.0 270 < th dose dependent rect. 21 7
119 530.26 atmosphere 1015.0 270 < th dose independent rect. 4 17
120 530.78 wind 9.0 270 < th dose independent rect. 9 8
123 531.46 wind 9.0 270 < th dose dependent rect. 22 5
127 532.01 precipitation 0.1 270 < th dose independent rect. 15 8
128 532.01 precipitation 0.1 270 < th dose dependent rect. 15 8
130 532.35 temperature 30.0 270 < th dose independent rect. 3 7
137 533.44 temperature 10.0 270 > th dose independent rect. 9 8
138 533.44 atmosphere 1015.0 270 < th dose independent rect. 9 8
139 533.44 temperature 10.0 270 > th dose independent rect. 17 16
158 534.12 humidity 50.0 270 > th dose independent rect. 17 16
162 535.95 wind 9.0 270 < th dose independent rect. 15 8
165 536.12 wind 9.0 270 < th dose independent rect. 17 16
166 536.12 precipitation 0.1 270 < th dose independent rect. 11 16
167 536.12 precipitation 0.1 270 < th dose dependent rect. 11 16
174 537.69 atmosphere 1015.0 270 < th dose independent rect. 10 17
178 538.70 precipitation 0.1 270 < th dose independent rect. 9 8
179 538.70 precipitation 0.1 270 < th dose dependent rect. 9 8
180 538.75 precipitation 0.1 270 < th dose independent rect. 23 16
181 538.75 precipitation 0.1 270 < th dose dependent rect. 23 16
183 539.39 radiation 40.0 270 < th dose independent rect. 17 16
186 539.85 humidity 50.0 270 > th dose dependent rect. 21 7
215 542.83 atmosphere 995.0 270 > th dose independent rect. 17 16
218 544.31 radiation 40.0 270 < th dose dependent rect. 15 7
223 545.79 humidity 50.0 270 > th dose dependent rect. 22 5
233 547.48 atmosphere 995.0 270 > th dose independent rect. 4 17
248 551.10 wind 1.0 270 > th dose independent rect. 9 8
264 554.28 radiation 1.0 270 > th dose independent rect. 9 8
276 555.59 wind 1.0 270 > th dose independent rect. 15 8
302 556.33 temperature 10.0 90 > th dose dependent rect. 11 17
303 556.36 atmosphere 995.0 270 > th dose independent rect. 9 8
323 558.99 atmosphere 995.0 270 > th dose independent rect. 15 7
330 559.85 radiation 1.0 270 < th dose dependent rect. 21 11
331 560.04 precipitation 0.1 270 < th dose independent rect. 4 5
332 560.04 precipitation 0.1 270 < th dose dependent rect. 4 5
347 561.36 temperature 30.0 270 < th dose independent rect. 4 5
350 561.45 atmosphere 995.0 270 > th dose independent rect. 11 16
369 562.78 humidity 50.0 270 > th dose independent rect. 4 5
379 563.71 wind 9.0 270 < th dose dependent rect. 3 8
392 565.14 radiation 1.0 270 < th dose dependent rect. 21 16
407 566.55 atmosphere 1015.0 270 < th dose independent rect. 9 19
411 567.07 temperature 15.0 10 > th dose dependent rect. 24 5
412 567.21 radiation 40.0 270 < th dose independent rect. 4 5
415 567.71 radiation 1.0 90 < th dose dependent rect. 23 16
429 570.46 humidity 50.0 270 > th dose independent rect. 9 7
433 570.99 radiation 40.0 270 < th dose independent rect. 3 7
441 571.76 radiation 1.0 90 < th dose independent rect. 23 16
451 572.67 humidity 50.0 270 > th dose independent rect. 15 7
463 574.44 radiation 1.0 90 < th dose dependent rect. 23 9
496 577.45 temperature 10.0 270 > th dose dependent rect. 4 5
508 577.79 radiation 1.0 90 < th dose independent rect. 23 8
518 578.90 temperature 20.0 10 > th dose independent rect. 24 5
589 581.65 wind 1.0 270 > th dose independent rect. 22 6
592 581.85 temperature 30.0 270 < th dose independent rect. 17 16
649 584.08 temperature 10.0 270 > th dose dependent rect. 3 7
696 588.00 radiation 1.0 270 < th dose independent rect. 21 12
739 590.49 humidity 50.0 270 > th dose independent rect. 14 9
745 590.95 radiation 1.0 90 > th dose independent rect. 4 7
758 591.21 radiation 1.0 10 < th dose dependent rect. 24 16
769 592.02 radiation 1.0 270 < th dose independent rect. 21 17
772 592.13 atmosphere 1015.0 270 < th dose independent rect. 15 7
793 593.79 radiation 10.0 10 < th dose dependent rect. 24 14
824 595.04 radiation 10.0 10 < th dose dependent sin 7 NA
841 596.33 wind 1.0 270 > th dose independent rect. 10 17
843 596.65 radiation 20.0 30 < th dose dependent rect. 16 8
906 599.17 radiation 40.0 270 < th dose dependent rect. 16 17
918 599.77 radiation 1.0 10 < th dose dependent rect. 24 12
947 601.50 wind 1.0 270 > th dose independent rect. 4 17
949 601.55 radiation 1.0 10 < th dose independent rect. 24 14
955 601.93 radiation 1.0 10 < th dose dependent rect. 24 6
956 601.96 atmosphere 995.0 270 > th dose dependent rect. 23 4
958 602.09 radiation 1.0 10 < th dose dependent rect. 24 8
962 602.11 wind 1.0 90 > th dose independent rect. 5 6