Os01g0922000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0922000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.81 | 0.401 | 6.18 | -0.791 | 0.804 | -1.22 | -1.08 | -0.356 | -0.112 | 11.6 | 25.58 | 6 | -- | -- |
| 72.99 | 0.398 | 6.19 | -0.833 | 0.797 | -1.22 | -0.997 | -- | -0.128 | 11.5 | 25.67 | 4 | -- | -- |
| 76.48 | 0.407 | 6.19 | -0.962 | 0.804 | -1.21 | -- | 0.401 | -0.148 | 11.3 | 25.63 | 4 | -- | -- |
| 76.81 | 0.408 | 6.19 | -0.894 | 0.813 | -1.21 | -- | -- | -0.132 | 11.3 | 25.6 | 4 | -- | -- |
| 107.42 | 0.483 | 6.25 | -1.22 | -- | -1.7 | -- | 1.19 | -0.257 | -- | 29.7 | 4 | -- | -- |
| 94.62 | 0.456 | 6.13 | -0.572 | 1.05 | -- | -0.992 | -- | 0.127 | 12 | -- | -- | -- | -- |
| 98.84 | 0.466 | 6.13 | -0.612 | 1.05 | -- | -- | -- | 0.122 | 11.9 | -- | -- | -- | -- |
| 108.52 | 0.485 | 6.23 | -1.03 | -- | -1.72 | -- | -- | -0.246 | -- | 27.99 | 2 | -- | -- |
| 96.06 | 0.459 | 6.15 | -- | 0.882 | -0.874 | -- | -- | 0.0274 | 11.6 | 25.7 | 4 | -- | -- |
| 168.32 | 0.606 | 6.15 | -0.644 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 108.72 | 0.488 | 6.12 | -- | 1.06 | -- | -- | -- | 0.19 | 11.9 | -- | -- | -- | -- |
| 134.89 | 0.541 | 6.19 | -- | -- | -1.42 | -- | -- | -0.0537 | -- | 29.79 | 2 | -- | -- |
| 179.26 | 0.625 | 6.14 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.53 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 2 | 71.57 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 25 | 72.67 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 40 | 73.15 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 42 | 73.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 43 | 73.26 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 45 | 73.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 49 | 73.35 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 52 | 73.41 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 53 | 73.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 54 | 73.44 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 64 | 73.71 | temperature | 20 | 30 | > th | dose independent | rect. | 3 | 23 |
| 80 | 74.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 245 | 76.35 | temperature | 15 | 10 | > th | dose dependent | sin | 9 | NA |
| 433 | 77.77 | temperature | 25 | 10 | < th | dose dependent | sin | 17 | NA |
| 492 | 78.08 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 511 | 78.17 | temperature | 30 | 10 | < th | dose dependent | sin | 9 | NA |
| 595 | 78.60 | temperature | 20 | 90 | < th | dose independent | rect. | 10 | 19 |
| 619 | 78.73 | temperature | 15 | 30 | > th | dose dependent | rect. | 9 | 17 |
| 634 | 78.80 | temperature | 15 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 636 | 78.82 | temperature | 15 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 676 | 78.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 19 |
| 678 | 79.00 | temperature | 20 | 10 | < th | dose independent | rect. | 11 | 19 |
| 727 | 79.20 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 23 |
| 729 | 79.21 | temperature | 20 | 10 | < th | dose independent | rect. | 15 | 22 |
| 731 | 79.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 16 |
| 743 | 79.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 755 | 79.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 774 | 79.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 819 | 79.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 846 | 79.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 851 | 79.48 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 858 | 79.48 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 13 |
| 878 | 79.52 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 881 | 79.52 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 910 | 79.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 930 | 79.61 | temperature | 20 | 10 | < th | dose independent | rect. | 8 | 22 |
| 995 | 79.72 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 22 |