Os01g0921600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit).
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Os01g0921600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Mitochondrial import receptor subunit TOM20 (Translocase of outer membrane 20 kDa subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.35 | 0.33 | 11.9 | 0.513 | 0.541 | -0.451 | 0.42 | 0.0884 | 0.128 | 17.9 | 25.2 | 355 | -- | -- |
| 49.36 | 0.327 | 11.9 | 0.535 | 0.543 | -0.448 | 0.36 | -- | 0.137 | 17.8 | 25.2 | 359 | -- | -- |
| 49.57 | 0.328 | 11.9 | 0.566 | 0.548 | -0.447 | -- | -0.113 | 0.147 | 17.5 | 25.26 | 365 | -- | -- |
| 49.6 | 0.328 | 11.9 | 0.533 | 0.546 | -0.452 | -- | -- | 0.136 | 17.6 | 25.22 | 360 | -- | -- |
| 59.47 | 0.359 | 11.8 | 0.312 | -- | -0.69 | -- | 0.458 | 0.0692 | -- | 25.62 | 373 | -- | -- |
| 57.55 | 0.356 | 11.8 | 0.668 | 0.851 | -- | 0.476 | -- | 0.331 | 17.8 | -- | -- | -- | -- |
| 58.05 | 0.357 | 11.8 | 0.666 | 0.854 | -- | -- | -- | 0.333 | 17.6 | -- | -- | -- | -- |
| 58.01 | 0.355 | 11.9 | 0.442 | -- | -0.756 | -- | -- | 0.0211 | -- | 25.65 | 364 | -- | -- |
| 56.79 | 0.351 | 11.9 | -- | 0.477 | -0.552 | -- | -- | 0.0456 | 17.3 | 25.3 | 370 | -- | -- |
| 95.95 | 0.458 | 11.8 | 0.638 | -- | -- | -- | -- | 0.312 | -- | -- | -- | -- | -- |
| 69.74 | 0.391 | 11.8 | -- | 0.844 | -- | -- | -- | 0.259 | 17.7 | -- | -- | -- | -- |
| 63.04 | 0.37 | 11.9 | -- | -- | -0.802 | -- | -- | -0.0443 | -- | 25.7 | 366 | -- | -- |
| 106.7 | 0.482 | 11.8 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 2 | 41.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 3 | 41.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 14 | 43.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 33 | 43.72 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 17 |
| 77 | 44.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 157 | 45.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 190 | 46.19 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 20 |
| 236 | 46.60 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 240 | 46.61 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 7 |
| 256 | 46.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 299 | 47.09 | temperature | 10 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 309 | 47.13 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 7 |
| 318 | 47.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 18 |
| 391 | 47.53 | temperature | 25 | 270 | < th | dose independent | sin | 13 | NA |
| 462 | 47.87 | temperature | 30 | 30 | < th | dose independent | rect. | 5 | 13 |
| 495 | 47.98 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 4 |
| 520 | 48.11 | temperature | 30 | 270 | < th | dose dependent | sin | 12 | NA |
| 542 | 48.17 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 2 |
| 557 | 48.23 | humidity | 70 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 569 | 48.26 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 643 | 48.50 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 652 | 48.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 8 |
| 659 | 48.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 676 | 48.59 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 14 |
| 696 | 48.64 | temperature | 20 | 10 | > th | dose independent | rect. | 24 | 5 |
| 698 | 48.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 711 | 48.68 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 757 | 48.78 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 21 |
| 791 | 48.85 | radiation | 1 | 30 | > th | dose independent | rect. | 5 | 4 |
| 803 | 48.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 806 | 48.86 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 816 | 48.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 831 | 48.90 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 914 | 49.08 | atmosphere | 1015 | 30 | < th | dose independent | rect. | 9 | 20 |
| 957 | 49.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 959 | 49.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 993 | 49.20 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 6 |