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Os01g0920300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.025) R2 : 0.726
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.22 (0.0647) R2dC : 0.715 R2C : 0.711
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.228 (0.0525) R2dN8 : 0.0146 R2N8 : 0.0103
σ : 0.47
deviance : 101.09
__
_____
C
peak time of C : 19.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.64 0.445 12.8 -0.271 2.31 0.785 0.0151 0.152 -0.204 17.7 0.1955 120 -- --
89.75 0.441 12.8 -0.267 2.31 0.785 -0.0146 -- -0.202 17.7 0.11 121 -- --
89.59 0.441 12.8 -0.274 2.33 0.785 -- 0.145 -0.207 17.7 0.06 125 -- --
89.7 0.441 12.8 -0.263 2.31 0.783 -- -- -0.2 17.7 0.06 123 -- --
190.7 0.643 12.8 -0.56 -- -2.16 -- 0.276 -0.545 -- 187.9 806 -- --
98.14 0.464 12.8 -0.335 2.22 -- -0.0648 -- -0.265 19.2 -- -- -- --
98.15 0.464 12.8 -0.334 2.22 -- -- -- -0.265 19.2 -- -- -- --
127.52 0.526 12.7 -0.833 -- -2.77 -- -- -0.353 -- 2.542 880 -- --
91.58 0.446 12.8 -- 2.32 0.797 -- -- -0.196 17.7 0.05941 123 -- --
359.5 0.886 12.7 -0.373 -- -- -- -- -0.303 -- -- -- -- --
101.09 0.47 12.8 -- 2.22 -- -- -- -0.228 19.2 -- -- -- --
132.03 0.535 12.7 -- -- -2.85 -- -- -0.37 -- 2.926 869 -- --
363.18 0.89 12.7 -- -- -- -- -- -0.262 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 75.07 temperature 20.0 270 > th dose independent rect. 4 3
2 75.94 temperature 20.0 270 > th dose independent rect. 3 5
3 76.40 temperature 20.0 90 > th dose dependent rect. 4 5
7 77.32 temperature 15.0 270 > th dose dependent rect. 4 3
16 78.66 temperature 20.0 10 > th dose dependent rect. 5 5
34 80.30 temperature 20.0 10 > th dose dependent rect. 20 14
36 80.39 temperature 25.0 10 > th dose independent rect. 6 3
46 80.59 temperature 15.0 90 > th dose dependent rect. 19 14
52 80.75 temperature 20.0 10 > th dose dependent rect. 24 10
65 81.19 temperature 20.0 10 > th dose dependent rect. 2 8
81 81.64 temperature 20.0 10 > th dose dependent rect. 22 12
89 81.89 temperature 20.0 10 > th dose dependent rect. 17 17
105 82.16 radiation 1.0 90 > th dose independent rect. 5 4
110 82.21 temperature 15.0 90 > th dose dependent rect. 17 16
124 82.27 temperature 25.0 270 > th dose dependent rect. 10 1
134 82.46 radiation 1.0 90 < th dose independent sin 10 NA
135 82.49 radiation 1.0 90 > th dose independent sin 10 NA
136 82.49 temperature 20.0 270 > th dose independent rect. 15 17
138 82.51 temperature 20.0 270 > th dose independent rect. 3 18
162 82.84 radiation 1.0 90 < th dose dependent sin 10 NA
183 83.13 temperature 25.0 270 > th dose independent rect. 9 4
184 83.14 humidity 50.0 10 > th dose independent rect. 10 20
192 83.23 temperature 20.0 270 > th dose dependent rect. 9 4
213 83.43 wind 1.0 30 > th dose independent rect. 10 20
226 83.57 temperature 10.0 270 > th dose dependent rect. 8 7
230 83.60 humidity 90.0 30 < th dose independent rect. 6 3
245 83.75 wind 9.0 270 < th dose independent rect. 7 21
247 83.78 temperature 25.0 270 > th dose independent rect. 10 1
248 83.78 wind 3.0 10 < th dose independent rect. 6 3
251 83.78 temperature 20.0 270 > th dose dependent rect. 8 6
260 83.86 humidity 80.0 270 > th dose independent rect. 4 3
265 83.89 humidity 50.0 270 > th dose independent rect. 7 21
268 83.90 radiation 10.0 270 < th dose independent rect. 4 3
273 83.93 temperature 25.0 10 > th dose independent rect. 20 14
282 83.98 temperature 20.0 90 > th dose independent rect. 5 16
283 83.98 humidity 50.0 270 > th dose independent rect. 9 18
286 84.02 wind 9.0 270 < th dose independent rect. 9 18
291 84.05 atmosphere 1000.0 30 > th dose independent rect. 6 17
298 84.12 radiation 30.0 30 < th dose independent rect. 6 4
299 84.12 temperature 30.0 90 < th dose dependent rect. 23 6
301 84.13 radiation 40.0 90 < th dose independent rect. 5 18
302 84.13 temperature 25.0 10 > th dose dependent rect. 10 5
316 84.22 wind 5.0 30 < th dose dependent rect. 6 3
320 84.23 temperature 30.0 10 < th dose dependent rect. 23 7
349 84.39 precipitation 0.1 270 < th dose independent rect. 4 3
350 84.39 temperature 30.0 270 < th dose independent rect. 3 6
354 84.39 precipitation 0.1 270 < th dose dependent rect. 4 3
365 84.45 wind 9.0 270 < th dose independent rect. 4 3
366 84.45 temperature 10.0 270 > th dose independent rect. 4 3
368 84.45 temperature 30.0 270 < th dose independent rect. 4 3
369 84.45 humidity 50.0 270 > th dose independent rect. 4 3
371 84.45 atmosphere 995.0 270 > th dose independent rect. 4 3
372 84.45 atmosphere 1015.0 270 < th dose independent rect. 4 3
374 84.45 temperature 10.0 270 > th dose independent rect. 7 21
392 84.51 wind 1.0 30 > th dose independent rect. 23 7
407 84.59 wind 9.0 270 < th dose dependent rect. 4 3
424 84.69 humidity 70.0 30 > th dose independent rect. 6 3
429 84.70 precipitation 0.1 270 < th dose independent rect. 3 6
432 84.70 precipitation 0.1 270 < th dose dependent rect. 3 6
435 84.73 precipitation 0.1 270 < th dose independent rect. 7 21
436 84.73 humidity 50.0 270 > th dose dependent rect. 4 3
438 84.73 precipitation 0.1 270 < th dose dependent rect. 7 21
439 84.74 wind 9.0 270 < th dose independent rect. 3 6
440 84.74 temperature 10.0 270 > th dose independent rect. 3 6
442 84.74 humidity 50.0 270 > th dose independent rect. 3 6
443 84.74 atmosphere 995.0 270 > th dose independent rect. 3 6
444 84.74 atmosphere 1015.0 270 < th dose independent rect. 3 6
445 84.74 temperature 10.0 270 > th dose independent rect. 9 18
447 84.74 temperature 30.0 270 < th dose dependent rect. 21 7
455 84.78 temperature 20.0 10 > th dose dependent sin 9 NA
460 84.79 radiation 40.0 270 < th dose dependent rect. 4 3
470 84.83 temperature 25.0 30 > th dose independent rect. 24 10
471 84.83 radiation 20.0 10 < th dose dependent rect. 23 7
480 84.88 radiation 1.0 90 < th dose dependent rect. 21 22
505 84.98 temperature 30.0 10 < th dose independent rect. 6 4
516 85.03 precipitation 0.1 270 < th dose independent rect. 9 18
518 85.03 precipitation 0.1 270 < th dose dependent rect. 9 18
532 85.04 radiation 1.0 90 < th dose dependent rect. 23 14
537 85.05 radiation 1.0 90 < th dose dependent rect. 23 12
541 85.06 radiation 1.0 90 < th dose dependent rect. 23 16
543 85.07 radiation 1.0 90 < th dose dependent rect. 23 9
546 85.07 radiation 1.0 90 < th dose dependent rect. 21 14
550 85.09 humidity 50.0 270 > th dose independent rect. 23 14
552 85.09 radiation 1.0 90 < th dose dependent rect. 21 11
555 85.09 radiation 1.0 90 < th dose dependent rect. 21 16
556 85.10 radiation 1.0 90 < th dose independent rect. 21 10
563 85.11 precipitation 0.1 10 < th dose independent rect. 6 17
567 85.11 precipitation 0.1 10 < th dose dependent rect. 6 17
570 85.12 radiation 1.0 90 < th dose dependent rect. 21 18
572 85.13 radiation 40.0 270 < th dose dependent rect. 3 7
578 85.16 radiation 1.0 90 < th dose independent rect. 21 14
580 85.16 temperature 15.0 720 > th dose dependent rect. 20 3
584 85.17 radiation 1.0 90 < th dose independent rect. 21 16
597 85.20 radiation 20.0 270 < th dose independent rect. 3 6
601 85.21 radiation 1.0 90 < th dose independent rect. 21 18
608 85.23 wind 1.0 270 > th dose independent rect. 9 18
615 85.25 wind 1.0 270 > th dose independent rect. 7 9
618 85.26 radiation 1.0 90 < th dose independent rect. 23 12
619 85.26 radiation 1.0 90 < th dose independent rect. 23 14
621 85.27 radiation 1.0 90 < th dose independent rect. 23 16
626 85.28 radiation 1.0 90 < th dose independent rect. 23 8
643 85.31 temperature 10.0 1440 > th dose independent rect. 24 7
646 85.31 temperature 30.0 1440 < th dose independent rect. 24 7
650 85.31 humidity 50.0 1440 > th dose independent rect. 24 7
655 85.31 atmosphere 995.0 1440 > th dose independent rect. 24 7
656 85.31 radiation 40.0 1440 < th dose independent rect. 24 7
660 85.31 humidity 50.0 270 > th dose independent rect. 8 8
662 85.31 temperature 10.0 1440 > th dose independent rect. 7 17
671 85.32 wind 9.0 30 < th dose independent rect. 23 7
674 85.32 wind 9.0 10 < th dose independent rect. 10 20
677 85.33 temperature 10.0 30 > th dose independent rect. 23 7
678 85.33 temperature 30.0 30 < th dose independent rect. 23 7
679 85.33 humidity 50.0 30 > th dose independent rect. 23 7
682 85.33 atmosphere 995.0 30 > th dose independent rect. 23 7
683 85.33 radiation 20.0 30 < th dose independent rect. 23 7
686 85.33 temperature 10.0 30 > th dose independent rect. 6 17
689 85.33 atmosphere 1015.0 30 < th dose independent rect. 6 17
693 85.35 wind 9.0 1440 < th dose independent rect. 24 7
711 85.40 radiation 30.0 10 < th dose independent rect. 6 17
715 85.41 temperature 25.0 10 > th dose independent rect. 22 12
717 85.41 humidity 50.0 270 > th dose dependent rect. 3 6
728 85.42 radiation 40.0 270 < th dose independent rect. 13 9
760 85.48 precipitation 0.1 30 < th dose independent rect. 23 7
763 85.48 precipitation 0.1 30 < th dose dependent rect. 23 7
770 85.50 temperature 10.0 1440 > th dose independent rect. 7 3
773 85.50 atmosphere 995.0 1440 > th dose independent rect. 7 3
774 85.50 atmosphere 1015.0 1440 < th dose independent rect. 7 3
778 85.50 temperature 10.0 1440 > th dose independent rect. 10 21
788 85.51 precipitation 0.1 10 < th dose independent rect. 6 4
789 85.51 wind 9.0 270 < th dose independent rect. 23 14
791 85.51 temperature 10.0 90 > th dose independent rect. 9 20
792 85.51 precipitation 0.1 10 < th dose dependent rect. 6 4
795 85.52 wind 7.0 270 < th dose independent rect. 8 7
797 85.52 humidity 50.0 10 > th dose independent rect. 10 7
807 85.53 wind 9.0 10 < th dose independent rect. 6 4
808 85.53 temperature 10.0 10 > th dose independent rect. 6 4
810 85.53 humidity 50.0 10 > th dose independent rect. 6 4
811 85.53 atmosphere 995.0 10 > th dose independent rect. 6 4
812 85.53 atmosphere 1015.0 10 < th dose independent rect. 6 4
814 85.53 temperature 10.0 10 > th dose independent rect. 10 20
872 85.64 wind 9.0 270 < th dose dependent rect. 3 6
885 85.65 wind 9.0 30 < th dose independent rect. 6 17
896 85.68 temperature 10.0 270 > th dose independent rect. 13 10
897 85.68 temperature 10.0 270 > th dose independent rect. 23 14
898 85.68 atmosphere 995.0 270 > th dose independent rect. 23 14
904 85.69 atmosphere 995.0 270 > th dose independent rect. 4 16
949 85.78 wind 1.0 270 > th dose independent rect. 8 7
960 85.80 precipitation 0.1 90 < th dose independent rect. 9 20
961 85.80 precipitation 0.1 10 < th dose independent rect. 10 20
962 85.80 precipitation 0.1 90 < th dose dependent rect. 9 20
963 85.80 precipitation 0.1 10 < th dose dependent rect. 10 20
977 85.82 atmosphere 995.0 270 > th dose independent rect. 3 18
987 85.83 atmosphere 995.0 270 > th dose dependent rect. 4 3