Os01g0920200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to E(Y)2 homolog (DC6) (Enhancer of yellow 2 homolog).
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Os01g0920200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to E(Y)2 homolog (DC6) (Enhancer of yellow 2 homolog).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.78 | 0.318 | 13.2 | -0.8 | 0.222 | 0.134 | 0.486 | -3.8 | -0.0786 | 21.1 | 18.69 | 714 | -- | -- |
| 54.91 | 0.348 | 13.1 | 0.0109 | 0.237 | -0.346 | -0.409 | -- | 0.133 | 20.1 | 29.53 | 3877 | -- | -- |
| 46.47 | 0.317 | 13.2 | -0.776 | 0.219 | 0.144 | -- | -3.52 | -0.0655 | 20.9 | 18.6 | 705 | -- | -- |
| 53.74 | 0.341 | 13.2 | 0.0483 | 0.25 | -0.295 | -- | -- | 0.102 | 21.2 | 29.83 | 4134 | -- | -- |
| 48.64 | 0.325 | 13.2 | -0.784 | -- | 0.281 | -- | -3.45 | -0.0854 | -- | 18.71 | 702 | -- | -- |
| 56.06 | 0.351 | 13.1 | -0.0109 | 0.228 | -- | -0.391 | -- | 0.144 | 20.6 | -- | -- | -- | -- |
| 56.53 | 0.352 | 13.1 | 0.000801 | 0.228 | -- | -- | -- | 0.144 | 21 | -- | -- | -- | -- |
| 56.96 | 0.351 | 13.1 | 0.0696 | -- | -0.269 | -- | -- | 0.0931 | -- | 29.9 | 4308 | -- | -- |
| 53.82 | 0.342 | 13.2 | -- | 0.237 | -0.273 | -- | -- | 0.089 | 21.4 | 30.1 | 4163 | -- | -- |
| 59.5 | 0.36 | 13.1 | 0.00115 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 56.53 | 0.352 | 13.1 | -- | 0.228 | -- | -- | -- | 0.144 | 21 | -- | -- | -- | -- |
| 57.07 | 0.352 | 13.1 | -- | -- | -0.256 | -- | -- | 0.0903 | -- | 30 | 4324 | -- | -- |
| 59.5 | 0.36 | 13.1 | -- | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.89 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 2 | 44.49 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 3 | 44.52 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 7 | 44.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 12 | 44.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 15 | 44.83 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 17 | 44.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 19 | 44.85 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 20 | 44.85 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 25 | 44.87 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 7 |
| 28 | 44.89 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 10 |
| 83 | 45.13 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 86 | 45.14 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 91 | 45.15 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 100 | 45.18 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 103 | 45.20 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 284 | 45.71 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 302 | 45.77 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 307 | 45.79 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 357 | 45.92 | wind | 7.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 359 | 45.92 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 393 | 46.01 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 421 | 46.06 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 431 | 46.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 445 | 46.12 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 448 | 46.13 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 453 | 46.14 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 454 | 46.14 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 485 | 46.18 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 486 | 46.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 490 | 46.18 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 493 | 46.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 507 | 46.20 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 530 | 46.24 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 21 |
| 534 | 46.25 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 20 |
| 537 | 46.26 | temperature | 20.0 | 720 | > th | dose dependent | no | NA | NA |
| 546 | 46.27 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 548 | 46.27 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 560 | 46.29 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 564 | 46.29 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 571 | 46.30 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 573 | 46.31 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 574 | 46.31 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 597 | 46.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 636 | 46.39 | wind | 1.0 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 671 | 46.43 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 727 | 46.50 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 823 | 46.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 828 | 46.60 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 859 | 46.63 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 867 | 46.64 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 883 | 46.65 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 13 |
| 998 | 46.74 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 1 |