Os01g0919600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF707 family protein.
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Os01g0919600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF707 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 327.83 | 0.851 | 4.7 | 0.697 | 0.503 | -1.71 | 0.652 | -0.549 | -0.903 | 6.37 | 64.03 | 7431 | -- | -- |
| 328.27 | 0.844 | 4.7 | 0.633 | 0.512 | -1.71 | 0.64 | -- | -0.925 | 6.38 | 65.03 | 7430 | -- | -- |
| 328.82 | 0.845 | 4.71 | 0.697 | 0.51 | -1.71 | -- | -0.491 | -0.914 | 6.14 | 64.42 | 7436 | -- | -- |
| 329.19 | 0.845 | 4.7 | 0.63 | 0.514 | -1.72 | -- | -- | -0.946 | 6.13 | 65.36 | 7438 | -- | -- |
| 339.44 | 0.858 | 4.71 | 0.733 | -- | -1.74 | -- | -0.705 | -0.876 | -- | 62.87 | 7200 | -- | -- |
| 380.88 | 0.915 | 4.58 | 0.362 | 0.432 | -- | 0.713 | -- | -0.402 | 6.6 | -- | -- | -- | -- |
| 382.11 | 0.915 | 4.58 | 0.372 | 0.437 | -- | -- | -- | -0.405 | 6.35 | -- | -- | -- | -- |
| 340.24 | 0.859 | 4.71 | 0.649 | -- | -1.74 | -- | -- | -0.919 | -- | 64.06 | 7203 | -- | -- |
| 339.29 | 0.858 | 4.72 | -- | 0.517 | -1.55 | -- | -- | -0.98 | 6.07 | 66.99 | 7438 | -- | -- |
| 392.01 | 0.925 | 4.59 | 0.384 | -- | -- | -- | -- | -0.396 | -- | -- | -- | -- | -- |
| 385.76 | 0.919 | 4.59 | -- | 0.442 | -- | -- | -- | -0.446 | 6.3 | -- | -- | -- | -- |
| 350.88 | 0.872 | 4.72 | -- | -- | -1.57 | -- | -- | -0.97 | -- | 65.96 | 7211 | -- | -- |
| 395.89 | 0.929 | 4.6 | -- | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 325.64 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 2 | 325.95 | humidity | 50 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 4 | 326.10 | humidity | 50 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 11 | 326.49 | humidity | 90 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 35 | 327.14 | humidity | 60 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 39 | 327.29 | humidity | 70 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 41 | 327.33 | humidity | 80 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 56 | 327.58 | humidity | 70 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 98 | 328.06 | humidity | 80 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 108 | 328.15 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 130 | 328.28 | humidity | 50 | 14400 | > th | dose dependent | sin | 23 | NA |
| 137 | 328.32 | humidity | 80 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 166 | 328.54 | humidity | 80 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 184 | 328.65 | humidity | 90 | 14400 | < th | dose dependent | sin | 22 | NA |
| 207 | 328.76 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 467 | 329.80 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 16 |
| 484 | 329.85 | humidity | 80 | 14400 | > th | dose independent | sin | 0 | NA |
| 521 | 329.98 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 545 | 330.05 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 15 |
| 612 | 330.24 | humidity | 80 | 14400 | < th | dose independent | sin | 0 | NA |
| 628 | 330.29 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 986 | 331.26 | humidity | 90 | 14400 | < th | dose dependent | no | NA | NA |