Os01g0919400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose- phosphate glucosyltransferase).
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Os01g0919400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sucrose-phosphate synthase (EC 2.4.1.14) (UDP-glucose-fructose- phosphate glucosyltransferase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.44 | 0.584 | 9.85 | 0.699 | 3.56 | -3.53 | 1.64 | 1.45 | -0.504 | 6.18 | 12.79 | 322 | 22 | 19 |
| 154.39 | 0.579 | 9.85 | 0.491 | 3.7 | -3.5 | 1.89 | -- | -0.529 | 6.19 | 11.11 | 345 | 21.6 | 19.1 |
| 158.88 | 0.587 | 9.86 | 0.81 | 3.66 | -3.67 | -- | 1.67 | -0.517 | 6.15 | 12.44 | 339 | 21.6 | 19.1 |
| 155.92 | 0.582 | 9.83 | 0.556 | 3.66 | -3.69 | -- | -- | -0.528 | 6.04 | 7.386 | 377 | 20.5 | 20.5 |
| 222.97 | 0.695 | 9.92 | 0.978 | -- | -5.51 | -- | 4.01 | -0.488 | -- | -20.72 | 874 | 23.8 | 18 |
| 312.8 | 0.829 | 9.98 | -0.0734 | 3.88 | -- | 1.31 | -- | -0.961 | 4.81 | -- | -- | -- | -- |
| 317.24 | 0.834 | 9.99 | -0.0791 | 3.89 | -- | -- | -- | -0.968 | 4.78 | -- | -- | -- | -- |
| 180.01 | 0.625 | 9.93 | 0.587 | -- | -5.72 | -- | -- | -0.566 | -- | -25.32 | 924 | 23.8 | 17.2 |
| 162.64 | 0.594 | 9.87 | -- | 3.63 | -3.59 | -- | -- | -0.572 | 5.9 | 5.887 | 382 | 20.1 | 20.9 |
| 1117.71 | 1.56 | 10 | 0.0669 | -- | -- | -- | -- | -0.867 | -- | -- | -- | -- | -- |
| 317.41 | 0.833 | 9.99 | -- | 3.89 | -- | -- | -- | -0.959 | 4.78 | -- | -- | -- | -- |
| 188.18 | 0.639 | 9.96 | -- | -- | -5.69 | -- | -- | -0.616 | -- | -24.76 | 927 | 23.8 | 17.2 |
| 1117.83 | 1.56 | 10 | -- | -- | -- | -- | -- | -0.874 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 158.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 19 |
| 5 | 160.66 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 9 | 163.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 16 |
| 40 | 175.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 42 | 175.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 17 |
| 54 | 177.45 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 148 | 188.17 | temperature | 10 | 270 | > th | dose dependent | sin | 22 | NA |
| 154 | 188.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 177 | 190.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 9 |
| 206 | 191.81 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 212 | 192.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 214 | 192.13 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 20 |
| 230 | 192.74 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 256 | 193.80 | temperature | 10 | 90 | > th | dose dependent | sin | 19 | NA |
| 304 | 195.76 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 9 |
| 318 | 196.55 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 18 |
| 402 | 199.38 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 486 | 202.63 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 16 |
| 699 | 207.99 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 21 |
| 857 | 210.77 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 1 | 17 |
| 884 | 211.23 | radiation | 1 | 90 | < th | dose independent | rect. | 16 | 9 |
| 976 | 212.46 | radiation | 1 | 90 | < th | dose dependent | rect. | 16 | 9 |