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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0919200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cell division protein FtsZ family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.58 (0.0487) R2 : 0.248
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.2 (0.191) R2dE : 0.222 R2E : 0.235
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.242 (0.104) R2dN8 : 0.013 R2N8 : 0.0256
σ : 0.911
deviance : 382.72
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_____
C
peak time of C : --
E
wheather : wind
threshold : 5.9
memory length : 6429
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20.4
open length of G : 0.28

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
347.75 0.876 3.67 0.236 0.473 1.86 -1.7 8.89 -0.349 22.2 4.996 4216 20.1 2.83
366.07 0.891 3.64 0.405 0.431 1.9 -1.96 -- -0.246 22.2 5.404 10851 20.4 0.0576
357.75 0.881 3.67 0.304 0.521 1.95 -- 9.18 -0.33 20.9 4.982 4046 20.1 2.95
369.43 0.895 3.61 0.226 0.538 2.16 -- -- -0.224 21.2 5.893 6078 20.4 0.283
372.99 0.899 3.66 0.321 -- 1.92 -- 9.12 -0.339 -- 5 4046 20.1 2.95
466.26 1.01 3.64 0.13 0.438 -- -1.79 -- -0.436 22.1 -- -- -- --
478 1.02 3.63 0.205 0.474 -- -- -- -0.429 21.1 -- -- -- --
382.26 0.911 3.6 0.192 -- 2.16 -- -- -0.273 -- 5.9 6012 20.4 0.283
370.06 0.896 3.61 -- 0.491 2.18 -- -- -0.267 20.9 5.907 6032 20.4 0.282
490.92 1.04 3.62 0.206 -- -- -- -- -0.432 -- -- -- -- --
479.11 1.02 3.64 -- 0.474 -- -- -- -0.452 21.1 -- -- -- --
382.72 0.911 3.58 -- -- 2.2 -- -- -0.242 -- 5.9 6429 20.4 0.28
492.04 1.04 3.63 -- -- -- -- -- -0.455 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 349.80 wind 5 4320 > th dose dependent rect. 20 3
5 354.81 wind 7 4320 > th dose dependent rect. 20 7
9 355.26 wind 7 4320 < th dose independent rect. 19 8
11 355.50 wind 7 4320 < th dose independent rect. 20 5
12 355.62 wind 7 4320 < th dose independent rect. 20 2
39 356.50 wind 7 4320 > th dose independent rect. 20 2
50 356.96 wind 7 4320 > th dose independent rect. 20 7
91 359.22 humidity 90 1440 < th dose dependent rect. 3 1
152 363.52 atmosphere 995 14400 > th dose independent rect. 18 3
153 363.75 atmosphere 995 14400 > th dose independent rect. 18 1
157 364.35 atmosphere 995 14400 < th dose independent rect. 16 2
158 364.35 atmosphere 995 14400 < th dose dependent rect. 16 1
234 366.79 atmosphere 995 14400 > th dose independent rect. 11 10
235 366.82 atmosphere 995 14400 > th dose independent rect. 13 8
236 366.85 atmosphere 995 14400 > th dose independent rect. 11 8
238 366.88 atmosphere 995 14400 > th dose independent rect. 13 6
343 368.72 humidity 70 1440 > th dose dependent rect. 3 1
382 369.43 humidity 90 1440 < th dose dependent rect. 2 5
383 369.43 humidity 90 1440 < th dose dependent rect. 23 8
386 369.61 humidity 50 1440 > th dose dependent rect. 2 4
416 369.92 atmosphere 995 14400 < th dose independent sin 22 NA
426 370.04 atmosphere 995 14400 < th dose dependent sin 22 NA
427 370.05 atmosphere 995 14400 > th dose independent sin 22 NA
763 371.28 atmosphere 995 14400 > th dose independent rect. 12 21
770 371.28 atmosphere 995 14400 > th dose independent rect. 14 23
798 371.31 atmosphere 995 14400 > th dose independent no NA NA
862 371.51 atmosphere 995 14400 < th dose independent no NA NA
912 371.52 atmosphere 995 14400 > th dose independent rect. 14 19