Os01g0916400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Selenium binding protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0916400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Selenium binding protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.88 | 0.508 | 12.6 | 0.257 | 0.74 | -0.648 | -1.17 | -6.68 | -0.0475 | 22 | 7 | 3154 | -- | -- |
| 128.83 | 0.529 | 12.7 | 0.312 | 0.695 | 0.503 | -1.11 | -- | -0.0933 | 21.9 | 7.101 | 2544 | -- | -- |
| 118.05 | 0.506 | 12.6 | 0.268 | 0.774 | -0.618 | -- | -6.88 | -0.0188 | 21.4 | 7 | 2562 | -- | -- |
| 131.88 | 0.535 | 12.7 | 0.504 | 0.736 | 0.788 | -- | -- | -0.0828 | 21.4 | 7.1 | 2519 | -- | -- |
| 149.08 | 0.569 | 12.6 | 0.334 | -- | -0.726 | -- | -8.48 | 0.0289 | -- | 6.7 | 2538 | -- | -- |
| 135.2 | 0.545 | 12.7 | 0.224 | 0.744 | -- | -1.3 | -- | -0.18 | 22.1 | -- | -- | -- | -- |
| 141.08 | 0.556 | 12.7 | 0.28 | 0.77 | -- | -- | -- | -0.174 | 21.5 | -- | -- | -- | -- |
| 163.06 | 0.595 | 12.7 | 0.547 | -- | 0.947 | -- | -- | -0.0737 | -- | 7.071 | 2400 | -- | -- |
| 137.7 | 0.547 | 12.7 | -- | 0.756 | 0.57 | -- | -- | -0.155 | 21.5 | 7.4 | 2513 | -- | -- |
| 175.96 | 0.62 | 12.7 | 0.285 | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
| 143.14 | 0.56 | 12.8 | -- | 0.77 | -- | -- | -- | -0.205 | 21.5 | -- | -- | -- | -- |
| 170.05 | 0.607 | 12.7 | -- | -- | 0.707 | -- | -- | -0.154 | -- | 7.08 | 2377 | -- | -- |
| 178.11 | 0.623 | 12.7 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.50 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 2 | 108.53 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 3 | 108.66 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 4 | 108.81 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 11 | 110.35 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 14 | 110.50 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 18 | 110.67 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 34 | 111.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 48 | 111.90 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 55 | 112.07 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 58 | 112.12 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 75 | 112.31 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 83 | 112.40 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 88 | 112.43 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 18 |
| 106 | 112.81 | wind | 7.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 115 | 112.92 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 124 | 113.14 | wind | 7.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 149 | 113.55 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 184 | 114.04 | wind | 7.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 186 | 114.05 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 199 | 114.21 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 205 | 114.28 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 222 | 114.61 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 229 | 114.68 | wind | 5.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 236 | 114.75 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 237 | 114.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 248 | 114.88 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 252 | 114.90 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 277 | 115.11 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 294 | 115.30 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 296 | 115.30 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 303 | 115.32 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 307 | 115.33 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 330 | 115.50 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 333 | 115.52 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 340 | 115.55 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 366 | 115.70 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 399 | 115.97 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 443 | 116.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 553 | 116.85 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 563 | 116.90 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 567 | 116.90 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 582 | 116.95 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 645 | 117.32 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 1 |
| 647 | 117.33 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 653 | 117.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 671 | 117.52 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 713 | 117.80 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 731 | 117.90 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 752 | 118.00 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 771 | 118.08 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 791 | 118.16 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 794 | 118.16 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 9 |
| 821 | 118.31 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 866 | 118.48 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 896 | 118.61 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 954 | 118.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 9 |
| 965 | 118.87 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 975 | 118.93 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 981 | 118.95 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 5 |
| 985 | 118.97 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |