Os01g0913700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0913700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.83 | 0.656 | 5.45 | 0.137 | 0.696 | -1.39 | -1.64 | 0.0779 | -0.282 | 21.3 | 21.3 | 611 | -- | -- |
| 194.85 | 0.65 | 5.45 | 0.127 | 0.692 | -1.4 | -1.64 | -- | -0.281 | 21.3 | 21.3 | 610 | -- | -- |
| 202.91 | 0.663 | 5.47 | 0.058 | 0.706 | -1.45 | -- | -0.474 | -0.284 | 21.9 | 21.23 | 649 | -- | -- |
| 203.2 | 0.664 | 5.45 | 0.19 | 0.731 | -1.42 | -- | -- | -0.275 | 22.2 | 21.35 | 760 | -- | -- |
| 216.77 | 0.686 | 5.43 | 0.185 | -- | -1.6 | -- | -0.368 | -0.26 | -- | 21.4 | 1577 | -- | -- |
| 265.41 | 0.764 | 5.53 | -0.372 | 0.452 | -- | -1.57 | -- | -0.662 | 21.2 | -- | -- | -- | -- |
| 272.7 | 0.773 | 5.53 | -0.324 | 0.47 | -- | -- | -- | -0.665 | 22.5 | -- | -- | -- | -- |
| 215.74 | 0.684 | 5.42 | 0.243 | -- | -1.44 | -- | -- | -0.206 | -- | 22 | 1558 | -- | -- |
| 204.06 | 0.665 | 5.46 | -- | 0.718 | -1.39 | -- | -- | -0.295 | 22.2 | 21.3 | 743 | -- | -- |
| 286.24 | 0.791 | 5.52 | -0.315 | -- | -- | -- | -- | -0.663 | -- | -- | -- | -- | -- |
| 275.46 | 0.776 | 5.52 | -- | 0.468 | -- | -- | -- | -0.629 | 22.4 | -- | -- | -- | -- |
| 216.93 | 0.686 | 5.43 | -- | -- | -1.34 | -- | -- | -0.239 | -- | 22.15 | 1517 | -- | -- |
| 288.87 | 0.793 | 5.51 | -- | -- | -- | -- | -- | -0.628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.71 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 3 | 189.77 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 4 | 189.81 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 6 | 190.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 13 | 190.81 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 15 | 191.06 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 19 | 191.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 34 | 192.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 36 | 192.29 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 56 | 192.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 106 | 194.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 146 | 194.81 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 149 | 194.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 242 | 196.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 255 | 196.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 273 | 196.82 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 277 | 196.83 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 302 | 197.02 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 308 | 197.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 4 |
| 424 | 197.70 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 435 | 197.75 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 447 | 197.83 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 521 | 198.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 915 | 199.87 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 954 | 200.06 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |