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Os01g0913000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Thioredoxin F-type 2, chloroplast precursor (TRX-F2).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.9 (0.0217) R2 : 0.737
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.9 (0.0542) R2dC : 0.715 R2C : 0.7
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.322 (0.0456) R2dN8 : 0.0372 R2N8 : 0.0216
σ : 0.409
deviance : 76.34
__
_____
C
peak time of C : 8.84
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.51 0.359 14.9 -0.146 2.91 1.63 2.01 1.71 -0.295 11.6 3.217e-06 299 -- --
63.43 0.371 14.9 -0.0254 2.93 1.63 0.574 -- -0.311 11.5 0.009269 297 -- --
63.56 0.371 14.9 -0.0347 2.78 1.53 -- 0.125 -0.236 11.4 0.00553 305 -- --
63.41 0.371 14.9 -0.0564 2.73 1.45 -- -- -0.291 11.3 2.503e-06 301 -- --
107.4 0.483 14.9 -0.37 -- 2.57 -- 0.543 -0.395 -- 2.322 1061 -- --
72.33 0.399 14.9 -0.244 1.91 -- 0.92 -- -0.346 8.8 -- -- -- --
75.15 0.406 14.9 -0.212 1.9 -- -- -- -0.346 8.83 -- -- -- --
98.47 0.462 14.9 0.118 -- 2.78 -- -- -0.122 -- 0.8223 1045 -- --
63.47 0.371 14.9 -- 2.73 1.45 -- -- -0.285 11.4 0.009998 301 -- --
281.35 0.784 14.9 -0.211 -- -- -- -- -0.332 -- -- -- -- --
76.34 0.409 14.9 -- 1.9 -- -- -- -0.322 8.84 -- -- -- --
98.63 0.463 14.9 -- -- 2.83 -- -- -0.137 -- 0.6 1043 -- --
282.53 0.785 14.9 -- -- -- -- -- -0.308 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.73 wind 9.0 270 < th dose independent rect. 13 22
2 48.13 wind 9.0 270 < th dose independent rect. 15 18
4 48.27 atmosphere 995.0 90 > th dose independent rect. 16 19
6 48.46 wind 9.0 270 < th dose independent rect. 14 20
7 48.51 wind 9.0 270 < th dose independent rect. 5 14
9 48.75 temperature 15.0 90 > th dose independent rect. 11 5
11 48.88 atmosphere 1015.0 90 < th dose independent rect. 11 5
12 48.88 temperature 10.0 90 > th dose independent rect. 16 19
13 49.01 precipitation 0.1 90 < th dose independent rect. 11 5
15 49.01 precipitation 0.1 90 < th dose dependent rect. 11 5
16 49.03 temperature 10.0 270 > th dose independent rect. 9 6
17 49.03 atmosphere 1015.0 270 < th dose independent rect. 9 6
19 49.07 wind 9.0 90 < th dose independent rect. 11 5
21 49.08 radiation 1.0 270 > th dose independent rect. 9 6
22 49.11 precipitation 0.1 270 < th dose independent rect. 9 6
23 49.11 precipitation 0.1 270 < th dose dependent rect. 9 6
24 49.20 temperature 15.0 270 > th dose independent rect. 11 2
25 49.24 radiation 40.0 270 < th dose independent rect. 15 18
27 49.25 atmosphere 995.0 270 > th dose independent rect. 11 2
28 49.25 atmosphere 1015.0 270 < th dose independent rect. 11 2
29 49.25 precipitation 0.1 270 < th dose independent rect. 11 2
30 49.25 temperature 10.0 270 > th dose independent rect. 13 22
31 49.25 precipitation 0.1 270 < th dose dependent rect. 11 2
32 49.30 wind 9.0 270 < th dose independent rect. 9 6
34 49.33 radiation 1.0 270 > th dose independent rect. 11 2
36 49.36 humidity 90.0 270 < th dose independent rect. 11 2
37 49.43 wind 1.0 270 > th dose independent rect. 11 2
38 49.43 temperature 30.0 270 < th dose independent rect. 11 2
39 49.43 atmosphere 995.0 90 > th dose independent rect. 11 5
41 49.44 wind 1.0 90 > th dose independent rect. 11 5
42 49.45 radiation 1.0 270 > th dose independent rect. 10 4
46 49.46 temperature 10.0 270 > th dose independent rect. 14 20
47 49.48 wind 9.0 270 < th dose independent rect. 11 2
48 49.49 atmosphere 995.0 270 > th dose independent rect. 9 6
49 49.54 radiation 1.0 270 < th dose dependent rect. 19 10
53 49.57 radiation 1.0 270 < th dose independent rect. 19 10
59 49.58 temperature 10.0 270 > th dose independent rect. 19 10
60 49.58 temperature 30.0 270 < th dose independent rect. 19 10
61 49.58 humidity 50.0 270 > th dose independent rect. 19 10
62 49.58 atmosphere 995.0 270 > th dose independent rect. 19 10
66 49.58 temperature 10.0 270 > th dose independent rect. 5 14
67 49.58 atmosphere 1015.0 270 < th dose independent rect. 5 14
69 49.61 wind 9.0 270 < th dose independent rect. 19 10
70 49.63 humidity 90.0 270 < th dose independent rect. 10 4
72 49.64 temperature 30.0 270 < th dose independent rect. 10 4
76 49.84 atmosphere 995.0 270 > th dose independent rect. 14 20
78 49.87 precipitation 0.1 270 < th dose independent rect. 19 10
79 49.87 precipitation 0.1 270 < th dose dependent rect. 19 10
82 50.11 wind 1.0 270 > th dose independent rect. 9 6
96 50.60 humidity 50.0 270 > th dose independent rect. 10 4
98 50.65 humidity 50.0 270 > th dose independent rect. 9 6
99 50.67 humidity 50.0 270 > th dose independent rect. 11 2
102 50.77 atmosphere 1015.0 90 < th dose independent rect. 16 19
111 51.02 precipitation 0.1 270 < th dose independent rect. 15 18
112 51.02 precipitation 0.1 270 < th dose dependent rect. 15 18
117 51.08 humidity 50.0 90 > th dose independent rect. 16 19
139 51.48 precipitation 0.1 270 < th dose independent rect. 5 14
140 51.48 precipitation 0.1 270 < th dose dependent rect. 5 14
145 51.64 precipitation 0.1 270 < th dose independent rect. 14 20
148 51.64 precipitation 0.1 270 < th dose dependent rect. 14 20
175 52.01 atmosphere 995.0 270 > th dose independent rect. 13 22
178 52.03 wind 7.0 270 < th dose independent rect. 14 7
181 52.05 radiation 1.0 270 < th dose dependent sin 12 NA
222 52.44 radiation 1.0 270 > th dose independent rect. 15 18
230 52.50 atmosphere 995.0 270 > th dose independent rect. 5 14
233 52.53 atmosphere 1015.0 270 < th dose independent rect. 14 20
248 52.58 temperature 10.0 90 > th dose dependent rect. 16 19
252 52.60 temperature 15.0 270 > th dose independent rect. 21 17
269 52.77 wind 7.0 90 < th dose independent rect. 16 7
270 52.77 radiation 40.0 270 < th dose independent rect. 14 7
271 52.77 atmosphere 995.0 270 > th dose dependent rect. 11 2
303 52.89 radiation 1.0 270 < th dose independent sin 12 NA
317 52.95 temperature 10.0 1440 > th dose independent rect. 12 5
321 52.95 temperature 10.0 1440 > th dose independent rect. 17 19
328 53.00 wind 1.0 270 > th dose independent rect. 14 8
331 53.02 precipitation 0.1 270 < th dose independent rect. 22 16
332 53.02 precipitation 0.1 270 < th dose dependent rect. 22 16
342 53.09 temperature 10.0 270 > th dose independent rect. 14 8
344 53.09 atmosphere 995.0 270 > th dose independent rect. 22 16
365 53.28 precipitation 0.1 270 < th dose independent rect. 13 22
366 53.28 precipitation 0.1 270 < th dose dependent rect. 13 22
367 53.29 temperature 20.0 270 > th dose independent rect. 14 7
368 53.29 wind 9.0 270 < th dose independent rect. 22 16
381 53.43 precipitation 0.1 10 < th dose independent rect. 16 19
382 53.43 precipitation 0.1 10 < th dose dependent rect. 16 19
386 53.47 atmosphere 1015.0 270 < th dose independent rect. 14 7
388 53.48 temperature 10.0 90 > th dose dependent rect. 11 5
390 53.49 atmosphere 995.0 270 > th dose independent rect. 14 7
395 53.52 radiation 1.0 270 < th dose dependent rect. 19 18
416 53.66 radiation 1.0 270 > th dose independent sin 12 NA
420 53.67 temperature 15.0 270 > th dose independent rect. 10 16
430 53.70 atmosphere 995.0 90 > th dose independent rect. 16 7
439 53.79 atmosphere 995.0 90 > th dose dependent rect. 11 5
441 53.83 temperature 10.0 270 > th dose dependent rect. 11 2
450 53.94 wind 1.0 90 > th dose independent rect. 16 7
456 54.01 precipitation 0.1 270 < th dose independent rect. 10 16
458 54.01 precipitation 0.1 270 < th dose dependent rect. 10 16
508 54.20 humidity 50.0 270 > th dose independent rect. 2 8
513 54.22 wind 9.0 270 < th dose independent rect. 2 8
514 54.22 temperature 10.0 270 > th dose independent rect. 2 8
515 54.22 atmosphere 995.0 270 > th dose independent rect. 2 8
517 54.22 atmosphere 1015.0 270 < th dose independent rect. 2 8
532 54.30 humidity 50.0 270 > th dose independent rect. 14 20
568 54.52 wind 9.0 90 < th dose dependent rect. 16 19
604 54.63 temperature 30.0 270 < th dose independent rect. 21 17
606 54.63 wind 9.0 90 < th dose dependent rect. 16 5
611 54.65 temperature 10.0 270 > th dose dependent rect. 15 6
616 54.71 temperature 30.0 90 < th dose independent rect. 23 17
619 54.73 wind 7.0 270 < th dose independent rect. 16 3
621 54.73 wind 9.0 270 < th dose dependent rect. 11 2
626 54.76 precipitation 0.1 270 < th dose independent rect. 2 8
629 54.76 precipitation 0.1 270 < th dose dependent rect. 2 8
666 55.00 precipitation 0.1 270 < th dose independent rect. 14 8
667 55.00 wind 9.0 270 < th dose dependent rect. 16 3
668 55.00 precipitation 0.1 270 < th dose dependent rect. 14 8
671 55.02 atmosphere 995.0 90 > th dose dependent rect. 16 7
682 55.07 atmosphere 995.0 10 > th dose dependent rect. 12 4
684 55.10 temperature 20.0 270 > th dose independent rect. 16 3
711 55.19 temperature 15.0 270 > th dose independent rect. 19 21
719 55.22 wind 9.0 270 < th dose dependent rect. 10 4
726 55.25 wind 1.0 270 > th dose dependent rect. 11 2
729 55.26 humidity 50.0 270 > th dose independent rect. 21 17
769 55.40 atmosphere 1015.0 270 < th dose independent rect. 22 16
794 55.52 wind 9.0 270 < th dose independent rect. 10 16
796 55.54 atmosphere 995.0 270 > th dose independent rect. 16 3
811 55.60 wind 9.0 270 < th dose dependent rect. 14 7
818 55.62 atmosphere 995.0 270 > th dose dependent rect. 15 5
822 55.63 atmosphere 995.0 270 > th dose dependent rect. 16 3
835 55.66 radiation 40.0 90 < th dose dependent rect. 16 7
839 55.67 temperature 10.0 10 > th dose dependent rect. 16 8
858 55.77 temperature 10.0 270 > th dose dependent rect. 3 7
895 55.92 radiation 30.0 270 < th dose independent rect. 16 3
904 55.95 temperature 10.0 270 > th dose independent rect. 16 3
906 55.95 atmosphere 1010.0 270 < th dose independent rect. 16 3
947 56.03 radiation 1.0 270 < th dose independent rect. 19 18
961 56.07 precipitation 0.1 10 < th dose independent rect. 16 7
963 56.07 precipitation 0.1 10 < th dose dependent rect. 16 7
982 56.12 wind 9.0 90 < th dose dependent rect. 16 7
997 56.16 precipitation 0.1 270 < th dose independent rect. 19 21
998 56.16 precipitation 0.1 270 < th dose dependent rect. 19 21