Os01g0912600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0912600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.38 | 0.241 | 8.77 | 0.311 | 0.27 | -1.74 | -0.154 | 0.815 | -0.00129 | 0.247 | 9.722 | 528 | -- | -- |
| 26.85 | 0.241 | 8.79 | 0.177 | 0.296 | -1.7 | -0.106 | -- | -0.038 | 0.446 | 11.18 | 555 | -- | -- |
| 26.48 | 0.24 | 8.77 | 0.309 | 0.267 | -1.74 | -- | 0.773 | -0.00253 | 0.224 | 10.07 | 523 | -- | -- |
| 26.9 | 0.242 | 8.79 | 0.182 | 0.295 | -1.71 | -- | -- | -0.0374 | 0.394 | 11.06 | 555 | -- | -- |
| 27.64 | 0.245 | 8.77 | 0.308 | -- | -1.77 | -- | 0.928 | -0.0021 | -- | 13.23 | 332 | -- | -- |
| 61.1 | 0.366 | 8.83 | -0.217 | 0.49 | -- | 0.092 | -- | -0.294 | 4.72 | -- | -- | -- | -- |
| 61.13 | 0.366 | 8.83 | -0.218 | 0.491 | -- | -- | -- | -0.295 | 4.7 | -- | -- | -- | -- |
| 28.24 | 0.247 | 8.78 | 0.162 | -- | -1.75 | -- | -- | -0.042 | -- | 12.96 | 332 | -- | -- |
| 27.66 | 0.245 | 8.79 | -- | 0.266 | -1.64 | -- | -- | -0.0678 | 0.523 | 13.14 | 523 | -- | -- |
| 73.91 | 0.402 | 8.84 | -0.199 | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
| 62.38 | 0.369 | 8.83 | -- | 0.487 | -- | -- | -- | -0.27 | 4.71 | -- | -- | -- | -- |
| 28.88 | 0.25 | 8.79 | -- | -- | -1.69 | -- | -- | -0.0663 | -- | 11.89 | 332 | -- | -- |
| 74.95 | 0.404 | 8.83 | -- | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 2 | 25.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 3 | 25.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 13 | 25.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 14 | 25.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 59 | 26.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 22 |
| 60 | 26.69 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 104 | 27.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 118 | 27.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 120 | 27.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 121 | 27.55 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 139 | 27.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 140 | 27.71 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 156 | 27.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 172 | 27.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 178 | 27.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 213 | 28.15 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 223 | 28.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 233 | 28.18 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 275 | 28.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 924 | 29.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 16 |