Os01g0911900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0911900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.78 | 0.547 | 6.74 | 0.379 | 1.14 | -0.835 | -0.0736 | -0.324 | 0.187 | 22 | 79.62 | 1213 | -- | -- |
| 135.89 | 0.543 | 6.74 | 0.399 | 1.14 | -0.858 | -0.119 | -- | 0.196 | 22 | 80.3 | 1210 | -- | -- |
| 135.79 | 0.543 | 6.74 | 0.379 | 1.15 | -0.838 | -- | -0.35 | 0.187 | 22 | 79.73 | 1198 | -- | -- |
| 135.94 | 0.543 | 6.74 | 0.411 | 1.15 | -0.874 | -- | -- | 0.192 | 22 | 80.06 | 1198 | -- | -- |
| 201.22 | 0.661 | 6.7 | 0.338 | -- | -0.713 | -- | -0.119 | 0.211 | -- | 84.99 | 1488 | -- | -- |
| 152.3 | 0.579 | 6.73 | 0.257 | 1.02 | -- | -0.195 | -- | 0.225 | 21.6 | -- | -- | -- | -- |
| 152.44 | 0.578 | 6.73 | 0.264 | 1.03 | -- | -- | -- | 0.226 | 21.6 | -- | -- | -- | -- |
| 201.13 | 0.661 | 6.7 | 0.37 | -- | -0.727 | -- | -- | 0.211 | -- | 85 | 1489 | -- | -- |
| 140.04 | 0.551 | 6.74 | -- | 1.13 | -0.803 | -- | -- | 0.165 | 22 | 83.3 | 1219 | -- | -- |
| 214.79 | 0.685 | 6.7 | 0.273 | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
| 154.28 | 0.581 | 6.73 | -- | 1.03 | -- | -- | -- | 0.196 | 21.6 | -- | -- | -- | -- |
| 204.59 | 0.666 | 6.71 | -- | -- | -0.68 | -- | -- | 0.173 | -- | 85.97 | 1492 | -- | -- |
| 216.75 | 0.687 | 6.71 | -- | -- | -- | -- | -- | 0.193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.74 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 3 | 132.99 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 8 | 134.25 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 2 |
| 11 | 134.65 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 15 | 135.24 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 16 | 135.24 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 18 | 135.36 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 21 | 135.39 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 35 | 136.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 36 | 136.09 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 47 | 136.52 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 49 | 136.55 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 53 | 136.65 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 54 | 136.66 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 64 | 136.74 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 6 |
| 65 | 136.75 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 89 | 137.06 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 10 |
| 110 | 137.25 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 123 | 137.37 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 179 | 137.69 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 198 | 137.79 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 224 | 137.91 | radiation | 10.0 | 30 | > th | dose independent | rect. | 16 | 17 |
| 233 | 137.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 248 | 138.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 249 | 138.07 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 250 | 138.07 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 274 | 138.13 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 326 | 138.32 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 336 | 138.35 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 353 | 138.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 359 | 138.38 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 367 | 138.43 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 405 | 138.54 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 426 | 138.56 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 431 | 138.59 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 454 | 138.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 493 | 138.77 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 503 | 138.80 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 550 | 138.87 | humidity | 50.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 562 | 138.90 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 572 | 138.93 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 5 |
| 623 | 139.03 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 624 | 139.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 633 | 139.04 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 637 | 139.04 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 639 | 139.05 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 648 | 139.06 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 651 | 139.06 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 652 | 139.06 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 653 | 139.06 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 675 | 139.08 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 698 | 139.09 | wind | 3.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 705 | 139.09 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 20 | 10 |
| 741 | 139.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 775 | 139.16 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 784 | 139.17 | wind | 3.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 789 | 139.17 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 815 | 139.20 | humidity | 70.0 | 1440 | < th | dose independent | sin | 15 | NA |
| 837 | 139.21 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 842 | 139.22 | humidity | 70.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 888 | 139.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 896 | 139.28 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 899 | 139.28 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 902 | 139.28 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 949 | 139.35 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 967 | 139.37 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 9 |