Os01g0911300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transporter associated with antigen processing-like protein.
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Os01g0911300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transporter associated with antigen processing-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.8 | 0.378 | 11.7 | -1.58 | 2.58 | -0.69 | 1.39 | 0.924 | -0.763 | 7.35 | 20.6 | 3965 | -- | -- |
| 66.47 | 0.38 | 11.8 | -1.72 | 2.57 | -0.76 | 1.58 | -- | -0.813 | 7.33 | 21.3 | 4000 | -- | -- |
| 69 | 0.387 | 11.8 | -1.6 | 2.6 | -0.706 | -- | 0.888 | -0.786 | 7.33 | 20.5 | 2844 | -- | -- |
| 69.59 | 0.389 | 11.8 | -1.77 | 2.59 | -0.909 | -- | -- | -0.85 | 7.35 | 19.7 | 2823 | -- | -- |
| 282.39 | 0.783 | 11.7 | -1.59 | -- | -1.71 | -- | 0.47 | -0.283 | -- | 25.3 | 517 | -- | -- |
| 80 | 0.419 | 11.8 | -2.26 | 2.58 | -- | 1.45 | -- | -1.05 | 7.4 | -- | -- | -- | -- |
| 85.75 | 0.434 | 11.8 | -2.23 | 2.58 | -- | -- | -- | -1.05 | 7.38 | -- | -- | -- | -- |
| 254.69 | 0.743 | 11.7 | -1.46 | -- | -1.87 | -- | -- | -0.392 | -- | 26.4 | 520 | -- | -- |
| 80.87 | 0.419 | 11.7 | -- | 2.58 | -1.98 | -- | -- | -0.395 | 7.32 | 17.5 | 47520 | -- | -- |
| 440.56 | 0.981 | 11.9 | -2.19 | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
| 216.62 | 0.688 | 11.8 | -- | 2.56 | -- | -- | -- | -0.805 | 7.44 | -- | -- | -- | -- |
| 321.96 | 0.836 | 11.7 | -- | -- | -2.13 | -- | -- | -0.352 | -- | 26.54 | 546 | -- | -- |
| 566.61 | 1.11 | 11.8 | -- | -- | -- | -- | -- | -0.769 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.58 | wind | 1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 2 | 61.45 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 3 | 61.69 | wind | 3 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 5 | 61.85 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 8 | 62.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 11 | 62.48 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 12 | 62.56 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 16 | 62.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 17 | 62.73 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 18 | 62.76 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 19 | 62.78 | humidity | 60 | 43200 | > th | dose independent | sin | 8 | NA |
| 21 | 62.80 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 22 | 62.80 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 24 | 62.81 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 5 |
| 25 | 62.82 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 33 | 62.90 | humidity | 70 | 43200 | < th | dose dependent | sin | 9 | NA |
| 43 | 62.96 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 48 | 63.04 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 49 | 63.04 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 50 | 63.06 | humidity | 60 | 43200 | < th | dose independent | sin | 8 | NA |
| 51 | 63.07 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 56 | 63.12 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 62 | 63.15 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 70 | 63.20 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 86 | 63.30 | humidity | 60 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 88 | 63.32 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 92 | 63.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 93 | 63.36 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 105 | 63.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 108 | 63.44 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 109 | 63.44 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 112 | 63.45 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 115 | 63.47 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 119 | 63.49 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 123 | 63.51 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 124 | 63.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 12 |
| 125 | 63.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 152 | 63.62 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 154 | 63.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 194 | 63.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 195 | 63.74 | wind | 1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 202 | 63.75 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 209 | 63.77 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 20 |
| 212 | 63.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 232 | 63.85 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 233 | 63.85 | temperature | 25 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 259 | 63.91 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 281 | 63.97 | humidity | 60 | 43200 | > th | dose independent | rect. | 16 | 20 |
| 288 | 63.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 299 | 64.00 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 317 | 64.05 | radiation | 1 | 270 | > th | dose independent | sin | 15 | NA |
| 319 | 64.05 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 12 |
| 330 | 64.08 | radiation | 1 | 270 | > th | dose independent | rect. | 13 | 6 |
| 342 | 64.09 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 352 | 64.09 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 361 | 64.10 | radiation | 1 | 270 | < th | dose dependent | sin | 15 | NA |
| 363 | 64.11 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 407 | 64.15 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 431 | 64.21 | radiation | 1 | 270 | < th | dose independent | sin | 15 | NA |
| 462 | 64.26 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 471 | 64.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 487 | 64.29 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 519 | 64.33 | humidity | 60 | 43200 | < th | dose independent | rect. | 16 | 21 |
| 555 | 64.38 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 567 | 64.39 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 578 | 64.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 4 |
| 626 | 64.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 652 | 64.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 663 | 64.48 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 668 | 64.48 | wind | 1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 674 | 64.48 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 22 |
| 689 | 64.50 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 698 | 64.51 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 702 | 64.51 | humidity | 60 | 43200 | < th | dose dependent | sin | 15 | NA |
| 703 | 64.51 | wind | 9 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 729 | 64.53 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 740 | 64.53 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 9 |
| 764 | 64.55 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 775 | 64.56 | radiation | 20 | 43200 | > th | dose independent | sin | 10 | NA |
| 803 | 64.57 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 17 |
| 812 | 64.58 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 15 |
| 824 | 64.59 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 829 | 64.59 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 23 |
| 840 | 64.60 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 21 |
| 859 | 64.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 864 | 64.61 | humidity | 60 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 870 | 64.62 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 935 | 64.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 13 |
| 981 | 64.67 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 9 |