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Os01g0910200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.36 (0.0235) R2 : 0.522
β1 : -1.3 (0.0858) R2dD : 0.25 R2D : 0.236
β2 : 0.951 (0.0582) R2dC : 0.282 R2C : 0.279
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0671 (0.05) R2dN8 : 0.00253 R2N8 : -0.00791
σ : 0.441
deviance : 88.48
__
_____
C
peak time of C : 21
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.5 0.419 8.35 -1.26 0.656 0.53 -0.709 0.497 -0.0615 18.3 0.1292 27 -- --
80.87 0.419 8.34 -1.24 0.65 0.541 -0.639 -- -0.0444 18 0.13 29 -- --
80.63 0.418 8.34 -1.25 0.655 0.533 -- 0.417 -0.0593 18.3 0.1261 29 -- --
81.71 0.421 8.34 -1.24 0.649 0.559 -- -- -0.0571 18.1 0.11 29 -- --
98.92 0.466 8.32 -1.28 -- 0.606 -- 0.277 -0.0361 -- 0.1 23 -- --
88.42 0.441 8.36 -1.3 0.951 -- 0.139 -- -0.0672 21 -- -- -- --
88.48 0.441 8.36 -1.3 0.951 -- -- -- -0.0671 21 -- -- -- --
98.99 0.465 8.32 -1.26 -- 0.606 -- -- -0.0326 -- 0.08 6 -- --
122 0.514 8.32 -- 0.582 0.613 -- -- 0.0571 17.6 0.002662 29 -- --
140.33 0.554 8.33 -1.3 -- -- -- -- -0.0732 -- -- -- -- --
133.02 0.54 8.32 -- 0.953 -- -- -- 0.0777 20.9 -- -- -- --
141.12 0.555 8.29 -- -- 0.623 -- -- 0.109 -- 0.04 6 -- --
184.84 0.635 8.3 -- -- -- -- -- 0.0709 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.68 atmosphere 995.0 10 > th dose dependent rect. 9 7
2 71.78 wind 9.0 270 < th dose independent rect. 6 21
3 71.86 humidity 50.0 270 > th dose independent rect. 6 21
8 72.25 humidity 50.0 270 > th dose independent rect. 7 19
9 72.33 precipitation 0.1 270 < th dose independent rect. 3 3
10 72.33 precipitation 0.1 270 < th dose dependent rect. 3 3
11 72.34 wind 9.0 270 < th dose independent rect. 7 19
12 72.37 atmosphere 1010.0 270 < th dose independent rect. 3 3
13 72.39 wind 7.0 270 < th dose independent rect. 3 3
14 72.40 humidity 50.0 30 > th dose independent rect. 9 20
16 72.47 temperature 10.0 270 > th dose independent rect. 3 3
18 72.47 temperature 30.0 270 < th dose independent rect. 3 3
19 72.47 humidity 50.0 270 > th dose independent rect. 3 3
22 72.47 atmosphere 995.0 270 > th dose independent rect. 3 3
24 72.47 radiation 20.0 270 < th dose independent rect. 3 3
27 72.47 temperature 10.0 270 > th dose independent rect. 6 21
28 72.56 radiation 40.0 270 < th dose dependent rect. 3 3
29 72.60 precipitation 0.1 90 < th dose independent rect. 15 17
31 72.60 precipitation 0.1 90 < th dose dependent rect. 15 17
37 72.81 atmosphere 995.0 90 > th dose independent rect. 8 7
38 72.82 radiation 20.0 30 < th dose dependent sin 12 NA
39 72.85 precipitation 0.1 270 < th dose independent rect. 2 5
40 72.85 precipitation 0.1 270 < th dose dependent rect. 2 5
42 72.88 wind 7.0 270 < th dose independent rect. 2 5
43 72.89 atmosphere 1010.0 270 < th dose independent rect. 2 5
44 72.91 radiation 20.0 270 < th dose independent rect. 2 5
48 72.96 temperature 10.0 270 > th dose independent rect. 2 5
50 72.96 temperature 30.0 270 < th dose independent rect. 2 5
51 72.96 humidity 50.0 270 > th dose independent rect. 2 5
53 72.96 atmosphere 995.0 270 > th dose independent rect. 2 5
57 72.96 temperature 10.0 270 > th dose independent rect. 7 19
58 72.97 temperature 10.0 90 > th dose independent rect. 8 7
59 72.97 atmosphere 1015.0 90 < th dose independent rect. 8 7
60 72.97 precipitation 0.1 90 < th dose independent rect. 8 7
61 72.97 temperature 10.0 90 > th dose independent rect. 15 17
62 72.97 precipitation 0.1 90 < th dose dependent rect. 8 7
67 73.02 humidity 50.0 90 > th dose independent rect. 8 7
68 73.05 precipitation 0.1 270 < th dose independent rect. 6 21
71 73.05 precipitation 0.1 270 < th dose dependent rect. 6 21
72 73.09 radiation 40.0 270 < th dose dependent rect. 2 5
80 73.20 humidity 50.0 10 > th dose independent rect. 9 6
85 73.27 atmosphere 1005.0 90 > th dose independent rect. 9 6
87 73.27 temperature 30.0 270 < th dose dependent rect. 3 3
89 73.30 radiation 1.0 10 > th dose independent rect. 9 6
91 73.33 wind 1.0 270 > th dose independent rect. 3 3
92 73.33 radiation 40.0 90 < th dose independent rect. 15 17
93 73.34 temperature 10.0 10 > th dose independent rect. 9 6
95 73.34 atmosphere 995.0 10 > th dose independent rect. 9 6
96 73.34 atmosphere 1015.0 10 < th dose independent rect. 9 6
97 73.34 precipitation 0.1 10 < th dose independent rect. 9 6
98 73.34 temperature 10.0 10 > th dose independent rect. 15 18
99 73.34 precipitation 0.1 10 < th dose dependent rect. 9 6
102 73.36 wind 9.0 90 < th dose independent rect. 8 7
105 73.39 precipitation 0.1 270 < th dose independent rect. 7 19
106 73.39 precipitation 0.1 270 < th dose dependent rect. 7 19
112 73.44 wind 1.0 30 > th dose independent rect. 9 6
115 73.46 wind 7.0 270 < th dose independent rect. 17 10
125 73.48 atmosphere 995.0 90 > th dose independent rect. 15 17
133 73.53 wind 1.0 270 > th dose independent rect. 2 5
152 73.56 temperature 10.0 1440 > th dose independent rect. 10 6
155 73.56 temperature 10.0 1440 > th dose independent rect. 16 18
159 73.57 radiation 1.0 90 > th dose independent rect. 8 7
160 73.57 wind 9.0 270 < th dose dependent rect. 3 3
163 73.58 humidity 50.0 270 > th dose dependent rect. 3 3
170 73.63 wind 9.0 90 < th dose independent rect. 15 17
192 73.72 wind 9.0 10 < th dose independent rect. 15 18
221 73.90 atmosphere 995.0 90 > th dose independent rect. 8 20
224 73.92 precipitation 0.1 10 < th dose independent rect. 5 4
225 73.92 precipitation 0.1 10 < th dose dependent rect. 5 4
226 73.93 wind 7.0 10 < th dose independent rect. 5 4
228 73.93 temperature 10.0 10 > th dose independent rect. 5 4
230 73.93 temperature 30.0 10 < th dose independent rect. 5 4
231 73.93 humidity 50.0 10 > th dose independent rect. 5 4
233 73.93 atmosphere 995.0 10 > th dose independent rect. 5 4
234 73.93 atmosphere 1015.0 10 < th dose independent rect. 5 4
235 73.93 wind 9.0 10 < th dose independent rect. 9 6
236 73.93 temperature 10.0 10 > th dose independent rect. 9 20
238 73.94 atmosphere 995.0 10 > th dose independent rect. 9 20
239 73.94 atmosphere 995.0 270 > th dose dependent rect. 9 1
254 74.02 atmosphere 995.0 10 > th dose independent rect. 15 18
255 74.03 radiation 40.0 90 < th dose independent rect. 13 19
260 74.05 precipitation 0.1 270 < th dose independent rect. 3 14
262 74.05 precipitation 0.1 270 < th dose dependent rect. 3 14
309 74.10 atmosphere 995.0 10 > th dose dependent rect. 9 20
330 74.21 wind 9.0 10 < th dose independent rect. 9 20
332 74.21 wind 9.0 270 < th dose dependent rect. 2 5
334 74.22 humidity 50.0 270 > th dose dependent rect. 2 5
335 74.23 temperature 10.0 1440 > th dose independent rect. 5 5
338 74.23 atmosphere 995.0 1440 > th dose independent rect. 5 5
339 74.23 atmosphere 1015.0 1440 < th dose independent rect. 5 5
340 74.23 temperature 10.0 1440 > th dose independent rect. 10 19
344 74.23 precipitation 0.1 10 < th dose independent rect. 9 20
345 74.23 precipitation 0.1 10 < th dose dependent rect. 9 20
352 74.25 atmosphere 1015.0 10 < th dose independent rect. 15 18
370 74.30 atmosphere 1015.0 90 < th dose independent rect. 15 17
383 74.35 temperature 15.0 270 > th dose independent rect. 3 14
388 74.37 atmosphere 995.0 270 > th dose independent rect. 6 21
404 74.41 wind 1.0 270 > th dose independent rect. 13 18
423 74.44 humidity 50.0 4320 > th dose independent rect. 5 5
438 74.45 radiation 30.0 270 < th dose dependent rect. 17 10
454 74.49 atmosphere 995.0 270 > th dose independent rect. 13 18
473 74.50 radiation 1.0 30 > th dose independent rect. 15 18
474 74.50 wind 9.0 10 < th dose dependent rect. 5 4
476 74.51 radiation 10.0 270 < th dose independent rect. 17 10
485 74.53 temperature 10.0 270 > th dose independent rect. 13 18
494 74.57 temperature 10.0 270 > th dose independent rect. 17 10
495 74.57 humidity 50.0 270 > th dose independent rect. 17 10
500 74.57 atmosphere 1015.0 270 < th dose independent rect. 3 14
508 74.58 temperature 10.0 90 > th dose dependent rect. 4 4
535 74.63 atmosphere 1015.0 270 < th dose dependent rect. 3 3
604 74.79 wind 1.0 270 > th dose independent rect. 9 1
606 74.79 temperature 10.0 10 > th dose dependent rect. 5 4
616 74.80 temperature 10.0 270 > th dose dependent rect. 4 2
620 74.81 temperature 10.0 270 > th dose independent rect. 9 1
621 74.81 atmosphere 995.0 270 > th dose independent rect. 9 1
622 74.81 atmosphere 1015.0 270 < th dose independent rect. 9 1
624 74.81 temperature 10.0 270 > th dose independent rect. 10 23
628 74.83 wind 9.0 270 < th dose independent rect. 9 1
641 74.87 humidity 50.0 270 > th dose independent rect. 9 1
659 74.89 precipitation 0.1 270 < th dose independent rect. 9 1
662 74.89 precipitation 0.1 270 < th dose dependent rect. 9 1
675 74.91 wind 9.0 270 < th dose dependent rect. 7 6
680 74.92 atmosphere 995.0 270 > th dose dependent rect. 3 3
681 74.92 atmosphere 995.0 270 > th dose dependent rect. 8 3
683 74.93 atmosphere 1005.0 270 > th dose independent rect. 9 2
701 74.98 precipitation 0.1 270 < th dose independent rect. 17 10
703 74.98 precipitation 0.1 270 < th dose dependent rect. 17 10
717 75.02 wind 9.0 270 < th dose dependent rect. 8 3
721 75.03 radiation 10.0 270 < th dose dependent rect. 15 12
771 75.11 radiation 1.0 30 > th dose independent rect. 5 4
789 75.12 radiation 1.0 30 < th dose independent sin 12 NA
810 75.13 wind 9.0 270 < th dose dependent rect. 17 9
837 75.18 wind 1.0 30 > th dose independent rect. 9 19
840 75.18 precipitation 0.1 270 < th dose independent rect. 10 23
842 75.18 precipitation 0.1 270 < th dose dependent rect. 10 23
867 75.24 wind 9.0 270 < th dose independent rect. 13 18
907 75.32 atmosphere 995.0 270 > th dose independent rect. 3 14
918 75.33 temperature 10.0 10 > th dose dependent rect. 15 18
922 75.35 humidity 60.0 270 > th dose independent rect. 8 3
945 75.37 atmosphere 995.0 10 > th dose dependent rect. 5 4
986 75.40 atmosphere 1015.0 270 < th dose dependent rect. 2 5