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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0909300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.37 (0.0189) R2 : 0.00902
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0811 (0.0398) R2dN8 : 0.0117 R2N8 : 0.00902
σ : 0.356
deviance : 58.12
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.58 0.344 3.25 1.19 0.0937 -0.803 -0.337 5.84 0.0293 4.85 28.53 1715 -- --
55.42 0.347 3.37 0.192 0.136 -0.15 -0.485 -- -0.0743 5.48 33.9 1957 -- --
53.86 0.342 3.25 1.2 0.0888 -0.816 -- 5.92 0.0335 4.74 28.5 1740 -- --
55.63 0.347 3.37 0.185 0.131 -0.151 -- -- -0.0916 4.77 33.8 1957 -- --
54.27 0.343 3.25 1.22 -- -0.826 -- 5.97 0.0422 -- 28.39 1751 -- --
56.34 0.352 3.36 0.149 0.128 -- -0.372 -- -0.069 5.13 -- -- -- --
56.69 0.353 3.36 0.149 0.125 -- -- -- -0.0672 5.23 -- -- -- --
56.37 0.35 3.37 0.186 -- -0.153 -- -- -0.0874 -- 32.8 1048 -- --
56.26 0.349 3.37 -- 0.147 -0.148 -- -- -0.108 4.65 33.39 1056 -- --
57.51 0.354 3.36 0.153 -- -- -- -- -0.0641 -- -- -- -- --
57.27 0.354 3.37 -- 0.128 -- -- -- -0.0838 5.19 -- -- -- --
57.27 0.352 3.37 -- -- -0.132 -- -- -0.105 -- 33 1048 -- --
58.12 0.356 3.37 -- -- -- -- -- -0.0811 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.73 atmosphere 1005.0 10 > th dose dependent rect. 2 2
2 51.85 atmosphere 1005.0 90 > th dose dependent rect. 2 1
4 51.99 radiation 1.0 43200 < th dose dependent rect. 3 1
5 52.04 atmosphere 1000.0 30 > th dose independent rect. 3 23
6 52.07 humidity 80.0 14400 < th dose dependent rect. 23 10
13 52.29 wind 7.0 14400 < th dose dependent rect. 11 1
15 52.33 wind 5.0 14400 < th dose independent rect. 11 1
21 52.42 wind 1.0 14400 > th dose dependent rect. 11 1
28 52.55 humidity 80.0 14400 < th dose dependent rect. 5 3
29 52.56 wind 5.0 14400 > th dose independent rect. 11 1
30 52.56 atmosphere 1000.0 720 > th dose independent rect. 3 8
41 52.73 temperature 25.0 90 > th dose independent rect. 1 1
46 52.78 temperature 25.0 720 > th dose dependent rect. 3 5
47 52.79 atmosphere 1005.0 90 > th dose independent rect. 2 1
49 52.79 humidity 90.0 10 > th dose dependent rect. 2 1
51 52.82 temperature 25.0 90 > th dose dependent rect. 1 1
63 52.89 atmosphere 1015.0 10 < th dose dependent rect. 2 1
65 52.90 wind 3.0 10 < th dose independent rect. 2 1
74 52.93 humidity 90.0 720 > th dose independent rect. 3 1
81 52.96 temperature 15.0 10 > th dose independent rect. 3 23
85 52.98 wind 1.0 30 > th dose independent rect. 2 1
88 52.98 wind 7.0 10 < th dose dependent rect. 2 1
96 52.99 wind 9.0 1440 < th dose independent rect. 3 1
97 52.99 temperature 10.0 1440 > th dose independent rect. 3 1
100 52.99 temperature 30.0 1440 < th dose independent rect. 3 1
104 52.99 humidity 50.0 1440 > th dose independent rect. 3 1
113 52.99 humidity 90.0 90 < th dose independent rect. 2 1
114 52.99 atmosphere 995.0 1440 > th dose independent rect. 3 1
115 52.99 radiation 1.0 1440 < th dose independent rect. 3 1
136 52.99 temperature 10.0 1440 > th dose independent rect. 4 23
152 53.00 temperature 10.0 10 > th dose independent rect. 2 1
155 53.00 temperature 30.0 10 < th dose independent rect. 2 1
156 53.00 humidity 50.0 10 > th dose independent rect. 2 1
159 53.00 atmosphere 995.0 10 > th dose independent rect. 2 1
160 53.00 atmosphere 1010.0 10 < th dose independent rect. 2 1
162 53.00 radiation 1.0 10 < th dose independent rect. 2 1
167 53.00 precipitation 0.1 10 < th dose independent rect. 2 1
171 53.00 temperature 10.0 10 > th dose dependent rect. 2 1
173 53.00 humidity 90.0 4320 > th dose dependent rect. 3 1
175 53.00 radiation 1.0 10 < th dose dependent rect. 2 1
180 53.00 precipitation 0.1 10 < th dose dependent rect. 2 1
206 53.01 humidity 50.0 10 > th dose dependent rect. 2 1
222 53.02 humidity 90.0 90 < th dose independent rect. 1 4
224 53.02 temperature 30.0 30 < th dose dependent rect. 2 1
243 53.05 precipitation 0.1 30 < th dose independent rect. 3 23
246 53.05 precipitation 0.1 30 < th dose dependent rect. 3 23
256 53.08 atmosphere 995.0 720 > th dose independent rect. 23 16
257 53.08 humidity 80.0 720 > th dose dependent rect. 3 1
263 53.12 wind 9.0 30 < th dose independent rect. 3 23
270 53.14 humidity 90.0 4320 > th dose independent rect. 3 1
288 53.24 temperature 20.0 30 > th dose independent rect. 3 4
297 53.27 temperature 25.0 720 > th dose independent rect. 3 6
301 53.29 temperature 10.0 720 > th dose independent rect. 15 8
302 53.29 temperature 10.0 720 > th dose independent rect. 23 16
309 53.31 temperature 10.0 720 > th dose independent rect. 3 8
311 53.31 temperature 10.0 720 > th dose independent rect. 11 16
325 53.36 humidity 50.0 720 > th dose independent rect. 3 8
331 53.38 humidity 80.0 14400 < th dose independent rect. 7 1
339 53.40 precipitation 0.1 720 < th dose independent rect. 15 8
341 53.40 precipitation 0.1 720 < th dose dependent rect. 15 8
342 53.41 wind 9.0 720 < th dose independent rect. 3 8
388 53.48 temperature 15.0 30 > th dose dependent rect. 3 4
396 53.50 temperature 25.0 30 > th dose dependent rect. 24 11
403 53.53 humidity 90.0 720 < th dose independent rect. 1 3
408 53.54 humidity 70.0 14400 > th dose independent rect. 8 1
412 53.54 temperature 25.0 30 > th dose dependent rect. 14 21
413 53.55 humidity 70.0 720 > th dose independent rect. 19 7
421 53.56 precipitation 0.1 14400 > th dose independent rect. 24 7
422 53.56 precipitation 0.1 14400 < th dose independent rect. 24 7
426 53.56 precipitation 0.1 14400 < th dose dependent rect. 24 7
441 53.59 temperature 25.0 30 > th dose dependent rect. 16 19
482 53.67 precipitation 0.1 14400 > th dose dependent rect. 24 7
488 53.68 atmosphere 1015.0 720 < th dose independent rect. 3 8
497 53.69 humidity 90.0 90 < th dose dependent rect. 2 1
503 53.70 humidity 50.0 30 > th dose independent rect. 3 23
508 53.71 temperature 30.0 1440 < th dose independent rect. 14 21
518 53.72 temperature 25.0 10 > th dose dependent rect. 6 5
520 53.72 temperature 25.0 10 > th dose dependent rect. 4 7
526 53.73 radiation 10.0 1440 > th dose independent rect. 17 13
527 53.73 temperature 30.0 1440 > th dose independent rect. 14 21
536 53.74 humidity 70.0 14400 > th dose independent rect. 4 5
537 53.74 temperature 25.0 720 < th dose independent rect. 2 8
563 53.75 radiation 10.0 1440 > th dose dependent rect. 17 13
598 53.80 radiation 10.0 1440 > th dose dependent rect. 17 1
612 53.81 precipitation 0.1 720 < th dose independent rect. 23 16
617 53.81 precipitation 0.1 720 < th dose dependent rect. 23 16
633 53.84 humidity 90.0 4320 < th dose independent rect. 3 2
634 53.84 humidity 90.0 4320 < th dose independent rect. 3 4
643 53.85 radiation 10.0 1440 > th dose independent rect. 17 1
656 53.85 atmosphere 995.0 720 > th dose independent rect. 11 16
674 53.87 atmosphere 995.0 720 > th dose independent rect. 15 8
676 53.87 radiation 1.0 720 < th dose dependent rect. 18 9
686 53.88 temperature 10.0 90 > th dose dependent rect. 3 16
688 53.89 radiation 10.0 1440 < th dose independent rect. 17 1
691 53.89 radiation 10.0 270 > th dose independent rect. 14 19
696 53.89 radiation 1.0 90 < th dose dependent rect. 5 23
707 53.91 precipitation 0.1 720 < th dose independent rect. 3 8
712 53.91 radiation 10.0 720 > th dose independent rect. 17 16
713 53.91 precipitation 0.1 720 < th dose independent rect. 11 16
724 53.91 precipitation 0.1 720 < th dose dependent rect. 3 8
726 53.91 precipitation 0.1 720 < th dose dependent rect. 11 16
732 53.93 wind 5.0 14400 < th dose independent sin 0 NA
747 53.94 radiation 10.0 1440 < th dose independent rect. 17 11
760 53.95 atmosphere 1000.0 10 > th dose independent rect. 2 12
762 53.95 wind 5.0 43200 < th dose dependent rect. 20 1
763 53.95 humidity 90.0 90 < th dose dependent rect. 2 3
764 53.95 humidity 80.0 4320 > th dose dependent rect. 3 6
766 53.95 temperature 10.0 30 > th dose dependent rect. 3 23
767 53.96 wind 5.0 14400 > th dose independent sin 0 NA
772 53.96 radiation 40.0 90 > th dose independent rect. 14 21
780 53.97 humidity 80.0 14400 > th dose independent rect. 23 1
786 53.97 radiation 10.0 1440 < th dose independent rect. 17 7
794 53.97 humidity 50.0 720 > th dose independent rect. 23 16
795 53.97 atmosphere 1000.0 90 > th dose independent rect. 3 16
807 53.98 temperature 30.0 1440 < th dose independent rect. 14 8
810 53.98 wind 7.0 720 < th dose independent rect. 17 12
811 53.98 humidity 60.0 10 > th dose independent rect. 14 12
814 53.98 temperature 30.0 1440 < th dose independent rect. 14 15
825 53.99 radiation 10.0 1440 < th dose independent rect. 17 5
831 53.99 temperature 30.0 1440 < th dose independent rect. 14 10
839 53.99 temperature 30.0 1440 > th dose dependent rect. 15 1
841 53.99 wind 5.0 30 < th dose dependent rect. 3 9
843 53.99 atmosphere 995.0 30 > th dose dependent rect. 4 15
849 54.00 temperature 30.0 1440 < th dose independent rect. 14 5
872 54.01 radiation 10.0 720 > th dose independent rect. 7 2
873 54.01 radiation 10.0 720 > th dose independent rect. 5 4
895 54.01 temperature 15.0 90 > th dose independent rect. 5 22
912 54.02 temperature 30.0 1440 > th dose independent rect. 14 5
971 54.04 humidity 90.0 720 < th dose dependent rect. 24 4
976 54.05 atmosphere 1005.0 720 < th dose independent rect. 17 1
987 54.05 radiation 40.0 30 < th dose independent rect. 14 12