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Os01g0908800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein prenyltransferase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.18 (0.0196) R2 : 0.465
β1 : 1.31 (0.0719) R2dD : 0.407 R2D : 0.267
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.469 (0.0419) R2dN8 : 0.197 R2N8 : 0.0578
σ : 0.369
deviance : 62.2
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.69 0.328 9.2 1.36 0.46 -0.524 0.266 -0.423 0.449 22.9 82.98 1136 -- --
48.92 0.326 9.19 1.38 0.472 -0.549 0.248 -- 0.464 22.8 84 1142 -- --
48.95 0.326 9.2 1.37 0.461 -0.527 -- -0.265 0.455 22.9 83 1142 -- --
49.03 0.326 9.19 1.39 0.462 -0.558 -- -- 0.459 22.9 84 1142 -- --
56.7 0.351 9.18 1.35 -- -0.447 -- -0.12 0.461 -- 86.51 1580 -- --
55.12 0.348 9.19 1.31 0.34 -- 0.0997 -- 0.468 22.4 -- -- -- --
55.17 0.348 9.19 1.31 0.339 -- -- -- 0.468 22.4 -- -- -- --
56.72 0.351 9.18 1.36 -- -0.454 -- -- 0.463 -- 86.86 1580 -- --
68.37 0.385 9.25 -- 0.338 -1.11 -- -- 0.204 22.4 67 47520 -- --
62.2 0.369 9.18 1.31 -- -- -- -- 0.469 -- -- -- -- --
100.28 0.468 9.22 -- 0.348 -- -- -- 0.322 22.7 -- -- -- --
75.32 0.404 9.24 -- -- -1.12 -- -- 0.203 -- 67 47520 -- --
107.74 0.484 9.21 -- -- -- -- -- 0.324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.29 temperature 20.0 270 > th dose independent rect. 19 17
2 44.37 wind 3.0 14400 < th dose dependent rect. 3 1
3 44.44 temperature 10.0 270 > th dose dependent rect. 7 5
4 44.44 temperature 10.0 270 > th dose dependent rect. 20 16
6 44.53 temperature 20.0 270 > th dose independent rect. 7 5
9 44.63 wind 1.0 270 > th dose independent rect. 12 19
15 44.94 wind 1.0 270 > th dose independent rect. 13 17
22 45.12 wind 7.0 270 < th dose independent rect. 7 5
32 45.22 precipitation 0.1 270 < th dose independent rect. 12 19
33 45.22 precipitation 0.1 270 < th dose dependent rect. 12 19
37 45.28 radiation 1.0 270 > th dose independent rect. 7 5
38 45.29 radiation 10.0 10 > th dose independent rect. 9 5
43 45.35 wind 3.0 14400 < th dose independent rect. 3 1
47 45.38 humidity 50.0 270 > th dose dependent rect. 17 9
66 45.60 radiation 10.0 270 > th dose independent rect. 9 1
67 45.60 temperature 10.0 10 > th dose dependent rect. 9 5
76 45.67 temperature 20.0 10 > th dose independent rect. 22 16
79 45.69 radiation 1.0 270 > th dose independent rect. 12 19
96 45.77 wind 3.0 14400 > th dose independent rect. 3 2
103 45.78 temperature 15.0 270 > th dose independent rect. 7 18
106 45.79 humidity 50.0 270 > th dose independent rect. 7 5
112 45.81 wind 9.0 270 < th dose dependent rect. 7 5
113 45.82 temperature 15.0 90 > th dose independent rect. 9 18
115 45.83 humidity 90.0 90 < th dose independent rect. 9 5
116 45.83 precipitation 0.1 270 < th dose independent rect. 7 5
117 45.83 precipitation 0.1 270 < th dose dependent rect. 7 5
119 45.85 temperature 20.0 10 > th dose independent rect. 9 5
122 45.85 radiation 10.0 270 < th dose dependent rect. 16 10
123 45.86 wind 1.0 270 > th dose independent rect. 7 5
128 45.87 precipitation 0.1 270 < th dose independent rect. 11 21
129 45.87 precipitation 0.1 270 < th dose dependent rect. 11 21
139 45.90 atmosphere 995.0 270 > th dose independent rect. 7 5
140 45.90 atmosphere 1015.0 270 < th dose independent rect. 7 5
141 45.90 temperature 10.0 270 > th dose independent rect. 12 19
159 45.96 precipitation 0.1 270 < th dose independent rect. 2 15
160 45.96 precipitation 0.1 270 < th dose dependent rect. 2 15
165 45.98 humidity 70.0 270 > th dose independent rect. 17 9
179 46.04 atmosphere 995.0 270 > th dose independent rect. 17 9
189 46.07 wind 9.0 270 < th dose independent rect. 12 19
214 46.15 radiation 1.0 270 < th dose independent rect. 16 10
222 46.17 temperature 30.0 270 < th dose independent rect. 17 9
250 46.25 humidity 50.0 270 > th dose independent rect. 17 9
256 46.26 wind 1.0 270 > th dose independent rect. 1 6
303 46.33 humidity 90.0 270 < th dose independent rect. 9 2
311 46.35 radiation 10.0 10 > th dose independent rect. 9 3
316 46.36 radiation 1.0 90 > th dose independent sin 13 NA
318 46.36 wind 1.0 14400 > th dose dependent rect. 2 2
322 46.37 wind 1.0 43200 < th dose independent rect. 5 6
325 46.38 wind 3.0 14400 > th dose independent rect. 24 6
335 46.40 radiation 1.0 90 < th dose dependent sin 13 NA
350 46.45 radiation 1.0 90 < th dose independent sin 13 NA
358 46.46 temperature 10.0 270 > th dose independent rect. 17 9
362 46.46 temperature 10.0 270 > th dose independent rect. 2 15
363 46.46 atmosphere 1015.0 270 < th dose independent rect. 2 15
366 46.47 wind 9.0 270 < th dose independent rect. 17 9
372 46.49 humidity 90.0 10 < th dose independent rect. 9 5
381 46.50 temperature 25.0 270 < th dose independent rect. 1 6
402 46.53 radiation 1.0 270 > th dose dependent rect. 8 3
403 46.53 humidity 90.0 10 < th dose dependent rect. 9 5
406 46.53 temperature 15.0 10 > th dose dependent rect. 22 16
413 46.55 wind 1.0 270 > th dose independent rect. 8 3
421 46.57 wind 7.0 10 < th dose independent rect. 9 5
440 46.60 radiation 40.0 90 < th dose independent rect. 13 20
449 46.62 radiation 30.0 90 < th dose independent rect. 3 7
451 46.62 wind 9.0 90 < th dose independent rect. 9 18
460 46.64 precipitation 0.1 270 < th dose independent rect. 8 3
470 46.64 precipitation 0.1 270 < th dose dependent rect. 8 3
487 46.67 precipitation 0.1 270 < th dose independent rect. 1 6
489 46.67 atmosphere 995.0 270 > th dose independent rect. 7 18
494 46.67 precipitation 0.1 270 < th dose dependent rect. 1 6
499 46.69 wind 1.0 43200 < th dose independent rect. 1 12
513 46.70 wind 5.0 43200 < th dose dependent rect. 11 2
521 46.72 atmosphere 995.0 270 > th dose independent rect. 8 3
522 46.72 atmosphere 1015.0 270 < th dose independent rect. 8 3
527 46.72 temperature 10.0 270 > th dose independent rect. 11 21
529 46.72 humidity 80.0 43200 > th dose dependent rect. 3 6
532 46.73 precipitation 0.1 90 < th dose independent rect. 3 6
538 46.73 precipitation 0.1 90 < th dose dependent rect. 3 6
549 46.74 wind 1.0 14400 > th dose dependent rect. 2 11
552 46.75 radiation 1.0 270 > th dose independent rect. 12 7
569 46.75 wind 1.0 14400 > th dose dependent rect. 24 13
580 46.77 wind 3.0 14400 < th dose independent rect. 19 11
581 46.77 wind 9.0 270 < th dose independent rect. 7 18
583 46.77 wind 7.0 14400 < th dose dependent rect. 2 11
603 46.81 temperature 20.0 270 > th dose independent rect. 18 8
618 46.82 atmosphere 995.0 90 > th dose independent rect. 9 18
635 46.84 radiation 40.0 90 < th dose independent rect. 3 15
638 46.84 wind 7.0 14400 < th dose dependent rect. 24 13
650 46.85 radiation 1.0 270 > th dose dependent rect. 9 1
672 46.88 wind 7.0 270 < th dose independent rect. 1 6
675 46.89 humidity 60.0 90 > th dose independent rect. 3 6
677 46.89 wind 1.0 43200 < th dose independent rect. 3 10
686 46.90 wind 3.0 14400 < th dose independent rect. 24 10
688 46.90 wind 5.0 14400 < th dose dependent rect. 2 8
692 46.91 atmosphere 995.0 90 > th dose dependent rect. 3 6
696 46.92 humidity 80.0 43200 > th dose independent rect. 24 20
703 46.93 wind 1.0 43200 > th dose independent rect. 5 6
707 46.93 humidity 50.0 270 > th dose independent rect. 7 18
713 46.93 radiation 1.0 270 < th dose dependent rect. 6 20
723 46.94 temperature 30.0 270 < th dose dependent rect. 1 6
727 46.94 temperature 10.0 10 > th dose dependent rect. 20 18
728 46.95 humidity 70.0 270 > th dose independent rect. 1 6
730 46.95 wind 3.0 14400 < th dose independent rect. 2 8
742 46.95 humidity 80.0 43200 > th dose dependent rect. 19 15
744 46.96 wind 7.0 90 < th dose independent rect. 3 6
747 46.96 radiation 20.0 10 < th dose independent rect. 3 17
750 46.96 humidity 80.0 43200 > th dose dependent rect. 4 4
752 46.96 humidity 80.0 43200 > th dose dependent rect. 2 8
756 46.97 radiation 20.0 270 < th dose independent rect. 1 6
758 46.97 wind 3.0 14400 > th dose independent rect. 2 8
760 46.97 radiation 20.0 10 < th dose independent rect. 3 15
775 46.98 temperature 10.0 270 > th dose independent rect. 1 6
778 46.98 humidity 50.0 270 > th dose independent rect. 1 6
780 46.98 atmosphere 995.0 270 > th dose independent rect. 1 6
781 46.98 atmosphere 1015.0 270 < th dose independent rect. 1 6
787 46.98 radiation 1.0 270 < th dose independent rect. 6 20
810 47.00 temperature 10.0 90 > th dose independent rect. 3 6
813 47.00 atmosphere 995.0 90 > th dose independent rect. 3 6
814 47.00 atmosphere 1015.0 90 < th dose independent rect. 3 6
815 47.00 precipitation 0.1 270 < th dose independent rect. 17 9
816 47.00 wind 3.0 14400 > th dose independent rect. 24 10
818 47.00 wind 3.0 14400 > th dose independent rect. 19 11
823 47.00 precipitation 0.1 270 < th dose dependent rect. 17 9
826 47.01 wind 3.0 43200 > th dose independent rect. 11 2
867 47.03 wind 9.0 270 < th dose independent rect. 2 15
884 47.04 humidity 70.0 43200 > th dose dependent sin 4 NA
904 47.05 radiation 40.0 90 < th dose dependent rect. 3 7
905 47.05 temperature 10.0 270 > th dose dependent rect. 12 8
907 47.05 humidity 70.0 43200 > th dose dependent rect. 2 12
911 47.05 humidity 70.0 43200 > th dose dependent rect. 1 14
916 47.06 precipitation 0.1 270 < th dose independent rect. 12 9
925 47.06 precipitation 0.1 270 < th dose dependent rect. 12 9
941 47.08 wind 3.0 14400 < th dose independent sin 9 NA
954 47.08 wind 1.0 43200 < th dose independent rect. 1 18
1000 47.11 radiation 20.0 10 < th dose independent rect. 3 8