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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0907600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cysteine endopeptidase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.83 (0.0321) R2 : 0.00136
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0533 (0.0676) R2dN8 : 0.00176 R2N8 : 0.00136
σ : 0.604
deviance : 167.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
162.37 0.599 2.82 -0.00419 0.497 -0.367 -0.923 1.22 0.0577 11.1 0.43 10 -- --
163.09 0.599 2.83 -0.0782 0.455 -0.331 0.473 -- 0.0433 11.2 0.2451 4 -- --
162.64 0.599 2.82 -0.0555 0.436 -0.314 -- 0.483 0.0515 11 0.44 9 -- --
164.05 0.6 2.83 -0.0599 0.444 -0.323 -- -- 0.0447 11.1 0.2451 4 -- --
165.69 0.603 2.83 -0.0765 -- -0.0369 -- 0.487 0.0468 -- 0.44 9 -- --
166.33 0.605 2.84 -0.102 0.0683 -- 0.447 -- 0.0427 11.3 -- -- -- --
167.04 0.605 2.83 -0.0859 0.0859 -- -- -- 0.0431 8.74 -- -- -- --
167.27 0.605 2.84 -0.0837 -- -0.0415 -- -- 0.0434 -- 0.19 9 -- --
164.14 0.6 2.82 -- 0.449 -0.327 -- -- 0.0514 11.1 0.18 4 -- --
167.46 0.605 2.84 -0.0857 -- -- -- -- 0.0438 -- -- -- -- --
167.24 0.605 2.83 -- 0.0857 -- -- -- 0.0526 8.81 -- -- -- --
167.45 0.605 2.83 -- -- -0.0424 -- -- 0.0527 -- 0.19 9 -- --
167.66 0.604 2.83 -- -- -- -- -- 0.0533 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 146.74 temperature 30.0 90 > th dose dependent rect. 8 1
15 146.86 temperature 30.0 90 > th dose independent rect. 8 1
160 149.85 atmosphere 1005.0 30 > th dose independent rect. 2 1
161 149.92 wind 3.0 30 < th dose independent rect. 2 1
162 149.93 atmosphere 1005.0 30 > th dose dependent rect. 2 1
186 150.14 temperature 10.0 30 > th dose independent rect. 2 1
188 150.14 temperature 30.0 30 < th dose independent rect. 2 1
189 150.14 humidity 50.0 30 > th dose independent rect. 2 1
193 150.14 atmosphere 1010.0 30 < th dose independent rect. 2 1
195 150.14 radiation 1.0 30 < th dose independent rect. 2 1
200 150.14 precipitation 0.1 30 < th dose independent rect. 2 1
201 150.14 temperature 10.0 30 > th dose independent rect. 3 23
202 150.14 radiation 1.0 30 < th dose dependent rect. 2 1
207 150.14 precipitation 0.1 30 < th dose dependent rect. 2 1
208 150.15 wind 9.0 30 < th dose dependent rect. 2 1
211 150.19 temperature 10.0 30 > th dose dependent rect. 2 1
216 150.35 humidity 50.0 30 > th dose dependent rect. 2 1
218 150.42 temperature 30.0 30 < th dose dependent rect. 2 1
239 150.64 atmosphere 1015.0 30 < th dose dependent rect. 2 1
245 150.86 wind 1.0 30 > th dose independent rect. 2 1
289 152.53 temperature 25.0 90 > th dose independent rect. 1 3
290 152.53 temperature 25.0 90 > th dose dependent rect. 1 4
293 152.71 temperature 25.0 270 > th dose independent rect. 1 1
334 154.44 wind 9.0 30 < th dose independent rect. 3 23
337 154.85 radiation 20.0 43200 < th dose dependent rect. 3 1
340 154.86 wind 9.0 1440 < th dose independent rect. 3 1
341 154.86 temperature 10.0 1440 > th dose independent rect. 3 1
344 154.86 temperature 30.0 1440 < th dose independent rect. 3 1
348 154.86 humidity 50.0 1440 > th dose independent rect. 3 1
357 154.86 atmosphere 995.0 1440 > th dose independent rect. 3 1
358 154.86 radiation 1.0 1440 < th dose independent rect. 3 1
378 154.86 temperature 10.0 1440 > th dose independent rect. 4 23
381 154.86 radiation 1.0 1440 < th dose dependent rect. 3 1
396 154.92 atmosphere 1000.0 10 < th dose independent rect. 9 1
415 155.63 atmosphere 995.0 30 > th dose independent rect. 3 23
419 155.97 atmosphere 1005.0 270 > th dose dependent rect. 1 1
429 156.40 atmosphere 1005.0 30 > th dose dependent rect. 1 4
470 157.14 precipitation 0.1 30 < th dose independent rect. 3 23
471 157.14 precipitation 0.1 30 < th dose dependent rect. 3 23
484 157.59 atmosphere 1000.0 90 < th dose dependent rect. 8 1
485 157.61 atmosphere 1000.0 10 < th dose dependent rect. 10 1
527 158.15 atmosphere 1000.0 720 > th dose independent rect. 3 6
590 159.12 humidity 70.0 90 < th dose dependent rect. 8 1
619 159.53 atmosphere 1000.0 270 > th dose independent rect. 3 12
620 159.59 temperature 25.0 1440 < th dose independent rect. 1 1
623 159.63 humidity 90.0 270 < th dose independent rect. 1 1
638 159.88 atmosphere 1000.0 720 > th dose independent rect. 5 3
642 159.90 wind 1.0 30 > th dose independent rect. 5 23
663 160.15 temperature 25.0 30 > th dose independent rect. 4 1
667 160.19 humidity 80.0 30 > th dose independent rect. 11 1
669 160.21 humidity 90.0 10 < th dose independent rect. 4 1
679 160.30 temperature 25.0 90 > th dose dependent rect. 4 1
681 160.31 humidity 70.0 720 > th dose independent rect. 3 6
682 160.31 humidity 50.0 30 > th dose independent rect. 3 23
686 160.36 temperature 20.0 10 > th dose independent rect. 2 3
693 160.40 atmosphere 1005.0 30 > th dose independent rect. 1 4
701 160.46 wind 1.0 30 > th dose dependent rect. 4 1
702 160.47 atmosphere 1000.0 90 > th dose independent rect. 5 13
715 160.58 radiation 20.0 90 < th dose independent rect. 10 19
718 160.61 temperature 30.0 30 < th dose independent rect. 3 23
731 160.70 radiation 20.0 90 < th dose dependent rect. 10 19
763 160.90 wind 3.0 30 < th dose dependent rect. 2 3
769 160.95 humidity 70.0 90 < th dose independent rect. 8 1
771 160.96 precipitation 0.1 720 < th dose independent rect. 9 18
772 160.96 precipitation 0.1 720 < th dose dependent rect. 9 18
776 161.00 precipitation 0.1 720 < th dose independent rect. 15 6
779 161.00 precipitation 0.1 720 < th dose dependent rect. 15 6
781 161.01 temperature 10.0 720 > th dose independent rect. 15 6
782 161.01 temperature 10.0 720 > th dose independent rect. 21 18
785 161.03 wind 9.0 720 < th dose independent rect. 3 6
786 161.03 temperature 10.0 720 > th dose independent rect. 3 6
790 161.03 temperature 10.0 720 > th dose independent rect. 9 18
793 161.05 atmosphere 995.0 720 > th dose independent rect. 21 18
795 161.08 humidity 80.0 4320 < th dose dependent rect. 1 1
812 161.19 atmosphere 1000.0 720 > th dose independent rect. 21 10
826 161.24 radiation 1.0 90 < th dose dependent rect. 17 12
827 161.25 precipitation 0.1 720 < th dose independent rect. 15 14
831 161.25 precipitation 0.1 720 < th dose dependent rect. 15 14
832 161.26 temperature 30.0 720 < th dose independent rect. 3 6
833 161.26 atmosphere 995.0 720 > th dose independent rect. 15 6
839 161.28 precipitation 0.1 720 < th dose independent rect. 3 6
841 161.28 atmosphere 1000.0 720 > th dose independent rect. 19 14
844 161.28 precipitation 0.1 720 < th dose dependent rect. 3 6
845 161.28 temperature 10.0 30 > th dose dependent rect. 19 10
856 161.31 radiation 1.0 90 < th dose independent rect. 17 12
861 161.32 humidity 50.0 720 > th dose independent rect. 17 10
865 161.33 atmosphere 995.0 720 > th dose independent rect. 9 18
867 161.35 atmosphere 1015.0 720 < th dose independent rect. 15 6
868 161.35 radiation 40.0 720 < th dose dependent rect. 17 10
871 161.36 precipitation 0.1 720 < th dose independent rect. 17 10
873 161.36 precipitation 0.1 720 < th dose dependent rect. 17 10
899 161.42 radiation 20.0 90 < th dose independent rect. 10 1
903 161.42 atmosphere 1000.0 30 < th dose dependent rect. 15 3
911 161.43 atmosphere 1000.0 10 < th dose dependent rect. 15 1
925 161.44 wind 1.0 30 > th dose independent rect. 4 1
927 161.44 wind 1.0 720 > th dose independent rect. 15 6
935 161.45 radiation 40.0 720 < th dose independent rect. 3 5
937 161.45 temperature 10.0 720 > th dose independent rect. 5 10
938 161.45 atmosphere 1015.0 720 < th dose independent rect. 5 10
939 161.45 temperature 10.0 720 > th dose independent rect. 15 14
940 161.45 radiation 40.0 10 < th dose independent rect. 21 14
944 161.46 atmosphere 1000.0 10 < th dose independent rect. 15 1
951 161.46 wind 9.0 720 < th dose independent rect. 21 18
977 161.50 radiation 1.0 10 < th dose independent rect. 7 5
983 161.50 temperature 10.0 720 > th dose independent rect. 17 10
985 161.50 radiation 20.0 720 < th dose independent rect. 17 10
991 161.50 temperature 10.0 720 > th dose independent rect. 3 14
996 161.50 radiation 1.0 10 < th dose dependent rect. 7 5