Os01g0902700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TGF-beta receptor, type I/II extracellular region family protein.
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Os01g0902700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TGF-beta receptor, type I/II extracellular region family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 240.66 | 0.729 | 11.4 | -0.904 | 6.05 | -5.19 | 3.27 | 2.6 | 0.134 | 4.75 | 0.1507 | 888 | -- | -- |
| 240.22 | 0.722 | 11.4 | -0.859 | 6.1 | -5.96 | 4.69 | -- | 0.106 | 5.03 | 0.162 | 930 | -- | -- |
| 258.19 | 0.748 | 11.5 | -1.01 | 6.17 | -5.39 | -- | 4.66 | 0.0291 | 4.75 | 0.1621 | 890 | -- | -- |
| 295.15 | 0.8 | 11.4 | -0.857 | 6.01 | -5.78 | -- | -- | 0.101 | 5.02 | 0.16 | 931 | -- | -- |
| 781.47 | 1.31 | 11.5 | 0.157 | -- | 1.96 | -- | 1.08 | 0.422 | -- | 10.01 | 4123 | -- | -- |
| 331.52 | 0.854 | 11.5 | -0.113 | 3.74 | -- | 2.67 | -- | 0.403 | 2.7 | -- | -- | -- | -- |
| 355.92 | 0.883 | 11.5 | -0.178 | 3.74 | -- | -- | -- | 0.388 | 2.6 | -- | -- | -- | -- |
| 780.24 | 1.31 | 11.4 | 0.00691 | -- | 1.88 | -- | -- | 0.531 | -- | 1.16 | 6233 | -- | -- |
| 313.43 | 0.825 | 11.4 | -- | 5.94 | -5.57 | -- | -- | 0.15 | 4.98 | 0.16 | 930 | -- | -- |
| 1176.3 | 1.6 | 11.4 | -0.0188 | -- | -- | -- | -- | 0.482 | -- | -- | -- | -- | -- |
| 356.75 | 0.884 | 11.5 | -- | 3.74 | -- | -- | -- | 0.408 | 2.6 | -- | -- | -- | -- |
| 401.42 | 0.933 | 11.5 | -- | -- | 3 | -- | -- | 0.386 | -- | 1.545 | 307 | -- | -- |
| 1176.31 | 1.6 | 11.4 | -- | -- | -- | -- | -- | 0.484 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 247.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 3 | 249.47 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 8 |
| 6 | 254.14 | humidity | 90.0 | 90 | < th | dose independent | rect. | 18 | 9 |
| 11 | 255.42 | humidity | 90.0 | 90 | < th | dose independent | rect. | 18 | 11 |
| 12 | 255.52 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 16 | 256.07 | radiation | 1.0 | 720 | < th | dose independent | rect. | 21 | 21 |
| 20 | 256.66 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 25 | 258.17 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 26 | 258.28 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 6 |
| 31 | 259.24 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 21 |
| 37 | 260.27 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 9 |
| 38 | 260.27 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 9 |
| 39 | 260.28 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 43 | 261.06 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 22 |
| 45 | 261.27 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 5 |
| 46 | 261.39 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 10 |
| 47 | 261.40 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 49 | 261.50 | humidity | 90.0 | 720 | < th | dose independent | rect. | 8 | 14 |
| 51 | 261.63 | radiation | 10.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 57 | 261.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 4 |
| 58 | 261.94 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 18 | 6 |
| 65 | 262.28 | radiation | 1.0 | 720 | < th | dose independent | rect. | 4 | 22 |
| 70 | 262.48 | temperature | 15.0 | 10 | > th | dose independent | rect. | 18 | 7 |
| 75 | 262.55 | radiation | 1.0 | 720 | > th | dose independent | rect. | 9 | 10 |
| 85 | 262.57 | temperature | 15.0 | 720 | > th | dose independent | rect. | 16 | 14 |
| 87 | 262.74 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 88 | 262.74 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 92 | 263.02 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 96 | 263.18 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 5 |
| 102 | 263.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 20 |
| 108 | 263.71 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 110 | 263.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 13 |
| 129 | 264.41 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 11 |
| 132 | 264.51 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 22 |
| 140 | 264.80 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 20 |
| 142 | 264.84 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 4 |
| 146 | 264.93 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 151 | 264.94 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 20 |
| 162 | 265.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 165 | 265.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 4 |
| 168 | 265.20 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 170 | 265.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 4 |
| 171 | 265.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 4 |
| 173 | 265.30 | radiation | 10.0 | 90 | < th | dose independent | sin | 15 | NA |
| 177 | 265.40 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 183 | 265.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 15 |
| 185 | 265.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 189 | 265.77 | wind | 7.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 193 | 265.87 | wind | 7.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 195 | 265.90 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 206 | 266.03 | temperature | 15.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 207 | 266.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 4 |
| 218 | 266.29 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 225 | 266.48 | radiation | 1.0 | 720 | > th | dose independent | rect. | 8 | 6 |
| 228 | 266.52 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 244 | 266.68 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 250 | 266.75 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 276 | 267.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 20 |
| 278 | 267.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 280 | 267.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 20 |
| 283 | 267.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 11 |
| 284 | 267.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 291 | 267.28 | radiation | 10.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 296 | 267.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 320 | 267.61 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 5 |
| 330 | 267.71 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 334 | 267.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 335 | 267.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 11 |
| 336 | 267.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 338 | 267.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 351 | 267.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
| 352 | 267.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 354 | 267.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 386 | 268.34 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 18 |
| 387 | 268.34 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 401 | 268.42 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 14 | 15 |
| 417 | 268.58 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 14 | 17 |
| 424 | 268.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 426 | 268.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 436 | 268.74 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 438 | 268.75 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 443 | 268.77 | wind | 1.0 | 270 | > th | dose dependent | rect. | 17 | 4 |
| 462 | 268.94 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 13 |
| 473 | 268.99 | wind | 9.0 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 481 | 269.05 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 487 | 269.07 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 522 | 269.39 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 20 |
| 523 | 269.39 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 536 | 269.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 11 |
| 537 | 269.49 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 538 | 269.49 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 13 |
| 546 | 269.55 | humidity | 90.0 | 720 | < th | dose independent | sin | 21 | NA |
| 562 | 269.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 11 |
| 602 | 270.08 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 18 | 7 |
| 636 | 270.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 19 |
| 648 | 270.44 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 649 | 270.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 4 |
| 661 | 270.56 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 673 | 270.67 | wind | 7.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 678 | 270.69 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 714 | 270.87 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 738 | 271.00 | wind | 7.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 750 | 271.06 | wind | 7.0 | 14400 | < th | dose independent | sin | 16 | NA |
| 799 | 271.35 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 12 |
| 814 | 271.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 831 | 271.49 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 13 | 10 |
| 846 | 271.56 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 914 | 271.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 19 |
| 940 | 271.99 | humidity | 80.0 | 720 | < th | dose independent | rect. | 9 | 21 |
| 985 | 272.11 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 4 |
| 989 | 272.13 | radiation | 1.0 | 720 | > th | dose independent | sin | 0 | NA |