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Os01g0902000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.69 (0.0244) R2 : 0.354
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.858 (0.0583) R2dC : 0.308 R2C : 0.299
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.281 (0.0514) R2dN8 : 0.0548 R2N8 : 0.0456
σ : 0.46
deviance : 96.9
__
_____
C
peak time of C : 0.727
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.61 0.422 8.59 0.69 0.826 -0.721 0.351 -4.24 0.393 0.591 0.8961 4312 -- --
83.23 0.425 8.72 -0.0605 0.876 -0.618 0.411 -- 0.113 0.825 36.91 11970 -- --
80.68 0.418 8.59 0.687 0.784 -0.764 -- -4.49 0.388 0.638 0.7924 4267 -- --
83.67 0.426 8.73 -0.0606 0.871 -0.614 -- -- 0.108 0.866 54.38 11964 -- --
108.9 0.489 8.67 -0.0813 -- 0.554 -- 0.204 0.288 -- 1.252 5523 -- --
95.6 0.458 8.69 -0.108 0.86 -- 0.46 -- 0.27 0.64 -- -- -- --
96.48 0.46 8.69 -0.126 0.86 -- -- -- 0.267 0.734 -- -- -- --
105.57 0.481 8.67 -0.115 -- 0.611 -- -- 0.296 -- 7.153 18401 -- --
83.77 0.426 8.72 -- 0.869 -0.62 -- -- 0.113 0.864 55.13 11962 -- --
142.75 0.558 8.67 -0.0953 -- -- -- -- 0.282 -- -- -- -- --
96.9 0.46 8.69 -- 0.858 -- -- -- 0.281 0.727 -- -- -- --
105.91 0.481 8.67 -- -- 0.606 -- -- 0.315 -- 6.489 47520 -- --
142.99 0.558 8.67 -- -- -- -- -- 0.293 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.63 radiation 1.0 1440 < th dose dependent rect. 18 1
7 77.89 radiation 1.0 1440 < th dose dependent rect. 18 9
10 77.94 radiation 1.0 4320 > th dose independent rect. 17 13
13 78.08 radiation 1.0 4320 < th dose dependent rect. 16 14
14 78.14 radiation 1.0 4320 > th dose independent rect. 17 2
25 78.32 radiation 1.0 4320 < th dose independent rect. 17 13
29 78.44 humidity 50.0 14400 < th dose dependent rect. 16 1
35 78.80 wind 1.0 14400 < th dose independent rect. 10 2
36 78.81 humidity 50.0 14400 < th dose independent rect. 16 1
38 78.86 wind 3.0 14400 < th dose dependent rect. 20 1
43 79.05 radiation 1.0 4320 < th dose dependent sin 13 NA
47 79.18 radiation 1.0 4320 < th dose dependent rect. 2 4
49 79.20 radiation 1.0 4320 < th dose independent rect. 17 2
50 79.20 radiation 1.0 4320 < th dose dependent rect. 4 2
56 79.21 radiation 1.0 4320 < th dose dependent rect. 21 9
64 79.25 radiation 1.0 4320 > th dose independent sin 13 NA
65 79.25 radiation 1.0 4320 < th dose independent rect. 17 10
71 79.27 wind 1.0 14400 > th dose independent rect. 10 2
72 79.27 precipitation 0.1 43200 < th dose independent rect. 13 5
73 79.27 precipitation 0.1 43200 < th dose dependent rect. 13 5
78 79.40 precipitation 0.1 43200 > th dose independent rect. 13 5
83 79.47 radiation 40.0 43200 > th dose independent rect. 7 1
99 79.47 radiation 40.0 43200 > th dose dependent rect. 7 1
167 79.67 radiation 1.0 4320 < th dose independent sin 13 NA
189 79.76 wind 1.0 14400 > th dose independent rect. 10 14
191 79.77 radiation 1.0 4320 < th dose dependent rect. 16 18
194 79.80 precipitation 0.1 43200 > th dose independent rect. 1 1
195 79.80 precipitation 0.1 43200 > th dose dependent rect. 1 1
209 79.83 wind 1.0 14400 > th dose independent rect. 18 6
210 79.84 wind 1.0 43200 < th dose dependent rect. 2 2
216 79.87 precipitation 0.1 43200 > th dose dependent rect. 8 11
220 79.89 precipitation 0.1 43200 < th dose independent rect. 13 8
221 79.89 precipitation 0.1 43200 < th dose dependent rect. 13 8
222 79.90 precipitation 0.1 43200 < th dose independent rect. 1 1
223 79.90 precipitation 0.1 43200 < th dose dependent rect. 1 1
224 79.91 wind 1.0 14400 < th dose independent rect. 18 6
225 79.92 temperature 30.0 270 < th dose independent rect. 5 18
226 79.92 atmosphere 1005.0 43200 < th dose dependent rect. 11 2
229 79.93 atmosphere 1000.0 43200 < th dose dependent rect. 1 8
232 79.94 precipitation 0.1 43200 > th dose independent rect. 13 8
234 79.95 wind 1.0 43200 < th dose independent rect. 2 2
237 79.96 humidity 50.0 14400 > th dose independent rect. 16 1
241 79.98 humidity 50.0 14400 < th dose dependent rect. 16 17
261 80.01 temperature 15.0 270 > th dose dependent rect. 9 20
262 80.01 temperature 15.0 270 > th dose dependent rect. 7 22
264 80.03 atmosphere 1000.0 43200 > th dose independent rect. 16 1
265 80.03 atmosphere 1000.0 43200 < th dose dependent rect. 3 5
266 80.03 atmosphere 1000.0 43200 < th dose dependent rect. 23 11
276 80.06 atmosphere 1000.0 43200 < th dose dependent sin 8 NA
281 80.08 temperature 30.0 270 < th dose independent rect. 4 21
288 80.10 atmosphere 995.0 43200 > th dose independent rect. 24 9
289 80.11 atmosphere 995.0 43200 > th dose independent rect. 3 5
294 80.11 atmosphere 1005.0 43200 < th dose dependent rect. 10 4
301 80.12 wind 1.0 43200 > th dose independent rect. 2 2
303 80.12 radiation 1.0 4320 > th dose independent rect. 16 18
305 80.12 precipitation 0.1 43200 > th dose dependent rect. 12 7
308 80.13 atmosphere 995.0 43200 < th dose independent rect. 23 10
329 80.14 atmosphere 995.0 43200 < th dose independent rect. 3 5
331 80.14 atmosphere 995.0 43200 > th dose independent rect. 21 13
347 80.16 precipitation 0.1 43200 > th dose dependent rect. 12 15
351 80.17 atmosphere 1000.0 43200 < th dose dependent rect. 5 2
363 80.20 atmosphere 995.0 43200 < th dose independent rect. 21 13
375 80.22 humidity 50.0 14400 > th dose independent rect. 16 17
383 80.24 wind 1.0 14400 < th dose independent rect. 10 14
393 80.26 atmosphere 1005.0 43200 < th dose dependent rect. 4 10
395 80.26 precipitation 0.1 43200 > th dose dependent rect. 8 19
406 80.28 atmosphere 1005.0 43200 < th dose dependent rect. 6 9
424 80.31 precipitation 0.1 43200 > th dose independent rect. 13 14
425 80.31 precipitation 0.1 43200 < th dose independent rect. 13 14
430 80.31 precipitation 0.1 43200 < th dose dependent rect. 13 14
440 80.33 atmosphere 995.0 43200 < th dose dependent sin 11 NA
452 80.34 humidity 50.0 14400 < th dose independent rect. 16 17
457 80.35 precipitation 0.1 43200 < th dose independent rect. 8 10
463 80.35 precipitation 0.1 43200 < th dose dependent rect. 8 10
468 80.36 atmosphere 995.0 43200 < th dose independent sin 9 NA
471 80.36 precipitation 0.1 43200 > th dose independent rect. 8 10
472 80.36 precipitation 0.1 43200 > th dose independent rect. 8 13
480 80.37 atmosphere 1000.0 43200 < th dose independent rect. 16 1
482 80.37 precipitation 0.1 43200 < th dose independent rect. 8 13
484 80.37 precipitation 0.1 43200 < th dose dependent rect. 8 13
488 80.38 wind 1.0 14400 < th dose dependent rect. 10 1
494 80.39 radiation 1.0 4320 < th dose independent rect. 16 18
513 80.41 radiation 20.0 1440 > th dose independent rect. 16 1
546 80.43 radiation 10.0 14400 > th dose independent rect. 5 4
593 80.45 atmosphere 995.0 43200 > th dose independent rect. 11 20
598 80.46 atmosphere 995.0 43200 > th dose independent sin 9 NA
602 80.46 precipitation 0.1 43200 > th dose dependent sin 21 NA
612 80.47 temperature 25.0 720 > th dose dependent rect. 19 18
626 80.50 precipitation 0.1 43200 > th dose independent sin 21 NA
630 80.50 precipitation 0.1 43200 > th dose dependent rect. 8 14
633 80.51 precipitation 0.1 43200 < th dose independent sin 21 NA
638 80.51 atmosphere 995.0 43200 < th dose independent rect. 11 19
641 80.51 precipitation 0.1 43200 < th dose dependent sin 21 NA
650 80.52 atmosphere 995.0 43200 < th dose independent rect. 12 17
676 80.54 wind 1.0 14400 < th dose dependent rect. 10 14
684 80.55 radiation 1.0 4320 > th dose independent rect. 9 22
705 80.56 wind 1.0 43200 < th dose dependent rect. 3 4
716 80.57 temperature 30.0 270 < th dose independent rect. 5 13
732 80.58 atmosphere 1005.0 43200 < th dose dependent sin 3 NA
785 80.61 temperature 25.0 43200 < th dose dependent rect. 10 1
803 80.62 wind 1.0 14400 < th dose dependent rect. 18 6
837 80.63 atmosphere 995.0 43200 < th dose dependent rect. 14 11
843 80.64 precipitation 0.1 43200 > th dose independent rect. 17 10
896 80.68 temperature 25.0 43200 < th dose independent rect. 12 1
897 80.68 radiation 10.0 43200 > th dose independent rect. 10 1
908 80.69 atmosphere 995.0 43200 < th dose independent sin 16 NA
913 80.69 precipitation 0.1 43200 < th dose independent rect. 17 10
916 80.69 atmosphere 995.0 43200 < th dose independent rect. 13 15
919 80.69 precipitation 0.1 43200 < th dose dependent rect. 17 10
928 80.70 precipitation 0.1 43200 > th dose independent rect. 7 20
930 80.70 radiation 1.0 4320 < th dose dependent no NA NA
933 80.70 radiation 1.0 4320 < th dose dependent rect. 4 20
936 80.70 radiation 1.0 4320 < th dose dependent rect. 1 22
938 80.70 radiation 1.0 4320 < th dose dependent rect. 21 22
945 80.70 radiation 1.0 4320 < th dose dependent rect. 23 23
957 80.71 temperature 25.0 43200 < th dose dependent rect. 10 3
966 80.71 radiation 1.0 4320 < th dose dependent rect. 4 18
968 80.71 radiation 1.0 4320 < th dose dependent rect. 1 19
975 80.71 radiation 1.0 4320 < th dose dependent rect. 23 20
998 80.72 radiation 1.0 4320 < th dose dependent rect. 4 15