Os01g0900900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os01g0900900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.14 | 0.388 | 12.2 | -1.23 | 1.43 | 1.08 | 0.459 | 0.344 | 0.191 | 5.42 | 23.52 | 211 | -- | -- |
| 68.52 | 0.386 | 12.2 | -1.22 | 1.43 | 1.07 | 0.6 | -- | 0.198 | 5.4 | 23.29 | 211 | -- | -- |
| 68.58 | 0.386 | 12.2 | -1.23 | 1.44 | 1.07 | -- | 0.491 | 0.187 | 5.39 | 23.8 | 211 | -- | -- |
| 69.05 | 0.387 | 12.2 | -1.23 | 1.48 | 1.07 | -- | -- | 0.182 | 5.6 | 22.16 | 174 | -- | -- |
| 79.39 | 0.415 | 12.2 | -1.36 | -- | 2.22 | -- | 0.488 | 0.178 | -- | 6.33 | 510 | -- | -- |
| 84.13 | 0.43 | 12.2 | -1.29 | 2.16 | -- | 0.744 | -- | 0.122 | 3.97 | -- | -- | -- | -- |
| 85.73 | 0.434 | 12.2 | -1.3 | 2.17 | -- | -- | -- | 0.118 | 3.97 | -- | -- | -- | -- |
| 80.18 | 0.417 | 12.2 | -1.23 | -- | 2.22 | -- | -- | 0.237 | -- | 5.661 | 510 | -- | -- |
| 108.93 | 0.486 | 12.2 | -- | 1.38 | 1.22 | -- | -- | 0.327 | 5.85 | 23.12 | 186 | -- | -- |
| 342.32 | 0.865 | 12.2 | -1.22 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 130.56 | 0.535 | 12.2 | -- | 2.14 | -- | -- | -- | 0.263 | 3.98 | -- | -- | -- | -- |
| 118.76 | 0.508 | 12.2 | -- | -- | 2.21 | -- | -- | 0.369 | -- | 3.67 | 511 | -- | -- |
| 381.3 | 0.911 | 12.2 | -- | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.35 | temperature | 25 | 30 | > th | dose dependent | sin | 1 | NA |
| 3 | 67.47 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 10 |
| 6 | 67.67 | radiation | 20 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 28 | 68.34 | temperature | 25 | 30 | > th | dose dependent | rect. | 22 | 19 |
| 38 | 68.56 | radiation | 40 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 48 | 68.77 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 23 |
| 55 | 68.84 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 10 |
| 96 | 68.99 | radiation | 20 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 110 | 69.12 | radiation | 1 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 116 | 69.15 | radiation | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 117 | 69.16 | radiation | 20 | 270 | < th | dose dependent | no | NA | NA |
| 118 | 69.17 | radiation | 10 | 270 | > th | dose independent | no | NA | NA |
| 200 | 69.19 | radiation | 20 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 219 | 69.35 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 235 | 69.43 | radiation | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 236 | 69.44 | radiation | 10 | 270 | > th | dose independent | sin | 2 | NA |
| 251 | 69.53 | radiation | 1 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 285 | 69.57 | radiation | 10 | 270 | < th | dose independent | rect. | 21 | 23 |
| 286 | 69.57 | radiation | 1 | 270 | > th | dose dependent | no | NA | NA |
| 351 | 69.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 14 |
| 392 | 69.66 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 22 |
| 418 | 69.74 | radiation | 1 | 270 | > th | dose dependent | sin | 3 | NA |
| 427 | 69.76 | radiation | 10 | 270 | > th | dose independent | rect. | 12 | 23 |
| 458 | 69.86 | humidity | 70 | 90 | > th | dose independent | rect. | 9 | 23 |
| 480 | 69.94 | humidity | 70 | 270 | > th | dose independent | rect. | 2 | 16 |
| 534 | 70.14 | radiation | 10 | 270 | < th | dose independent | rect. | 13 | 22 |
| 570 | 70.27 | radiation | 40 | 270 | > th | dose independent | sin | 12 | NA |
| 576 | 70.28 | radiation | 40 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 585 | 70.31 | humidity | 70 | 270 | > th | dose independent | rect. | 9 | 10 |
| 660 | 70.44 | temperature | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 762 | 70.47 | radiation | 20 | 270 | < th | dose independent | rect. | 9 | 23 |
| 775 | 70.49 | temperature | 25 | 30 | > th | dose dependent | rect. | 22 | 23 |
| 776 | 70.50 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 777 | 70.50 | humidity | 60 | 10 | > th | dose dependent | sin | 23 | NA |
| 805 | 70.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 870 | 70.64 | humidity | 70 | 270 | > th | dose independent | rect. | 23 | 21 |
| 875 | 70.66 | radiation | 10 | 270 | < th | dose independent | rect. | 15 | 23 |
| 896 | 70.69 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 11 |
| 914 | 70.73 | radiation | 10 | 270 | < th | dose independent | no | NA | NA |
| 946 | 70.79 | radiation | 30 | 270 | < th | dose dependent | rect. | 2 | 15 |