Os01g0899500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0899500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.22 | 0.591 | 10.9 | -4.05 | 2.21 | -0.814 | 1.91 | 2.85 | -1.42 | 2.79 | 20 | 1317 | -- | -- |
| 172.77 | 0.612 | 10.9 | -3.82 | 2.23 | -0.804 | 1.79 | -- | -1.32 | 2.98 | 20.01 | 1272 | -- | -- |
| 162.3 | 0.593 | 10.9 | -4.18 | 2.71 | -0.942 | -- | 3.83 | -1.42 | 2.71 | 20 | 1824 | -- | -- |
| 178.83 | 0.623 | 10.9 | -3.75 | 2.2 | -0.711 | -- | -- | -1.32 | 2.68 | 20.03 | 1351 | -- | -- |
| 314.29 | 0.826 | 10.5 | -2.8 | -- | 2.13 | -- | 1.9 | -0.801 | -- | 0.8636 | 1844 | -- | -- |
| 186.9 | 0.641 | 10.8 | -3.64 | 2.32 | -- | 1.47 | -- | -1.15 | 2.56 | -- | -- | -- | -- |
| 194.5 | 0.653 | 10.8 | -3.68 | 2.32 | -- | -- | -- | -1.16 | 2.5 | -- | -- | -- | -- |
| 254.09 | 0.742 | 10.7 | -3.3 | -- | 3.47 | -- | -- | -0.688 | -- | 1.213 | 1846 | -- | -- |
| 448.32 | 0.986 | 10.7 | -- | 2.29 | -2.06 | -- | -- | -0.757 | 2.51 | 220.1 | 47520 | -- | -- |
| 510.81 | 1.06 | 10.8 | -3.58 | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
| 551.88 | 1.1 | 10.7 | -- | 2.25 | -- | -- | -- | -0.746 | 2.48 | -- | -- | -- | -- |
| 468.84 | 1.01 | 10.7 | -- | -- | 4.53 | -- | -- | -0.464 | -- | 0.009998 | 1759 | -- | -- |
| 849.62 | 1.36 | 10.7 | -- | -- | -- | -- | -- | -0.7 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.71 | radiation | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 152.75 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 5 | 153.01 | radiation | 20 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 7 | 153.48 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 8 | 153.49 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 10 | 153.52 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 11 | 153.53 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 14 | 153.54 | radiation | 10 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 42 | 153.90 | radiation | 10 | 1440 | < th | dose independent | sin | 18 | NA |
| 62 | 154.30 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 67 | 154.49 | radiation | 20 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 120 | 156.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 138 | 156.78 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 159 | 157.17 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 166 | 157.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 169 | 157.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 175 | 157.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 208 | 157.67 | radiation | 20 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 231 | 157.90 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 263 | 158.20 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 276 | 158.40 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 302 | 158.61 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 322 | 158.81 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 348 | 158.97 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 352 | 158.99 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 353 | 159.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 354 | 159.01 | radiation | 10 | 720 | < th | dose independent | rect. | 3 | 14 |
| 356 | 159.01 | radiation | 20 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 368 | 159.03 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 16 |
| 381 | 159.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 21 | 21 |
| 436 | 159.08 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 603 | 159.66 | radiation | 20 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 606 | 159.67 | radiation | 20 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 626 | 159.80 | radiation | 40 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 696 | 160.08 | radiation | 20 | 1440 | < th | dose dependent | sin | 22 | NA |
| 729 | 160.33 | radiation | 40 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 739 | 160.41 | radiation | 40 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 755 | 160.57 | radiation | 40 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 777 | 160.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 799 | 160.75 | radiation | 40 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 822 | 161.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 834 | 161.04 | temperature | 25 | 720 | < th | dose independent | rect. | 9 | 2 |
| 879 | 161.18 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 3 |