Os01g0897600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Latex cyanogenic beta glucosidase.
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Os01g0897600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Latex cyanogenic beta glucosidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.68 | 0.435 | 11.7 | -2.43 | 1.07 | 1.53 | 0.664 | -4.44 | -0.492 | 6.98 | 21.5 | 1356 | -- | -- |
| 98.8 | 0.463 | 11.6 | -1.18 | 1.09 | 1.8 | 0.578 | -- | -0.159 | 7.31 | 11.37 | 1198 | -- | -- |
| 86.76 | 0.434 | 11.7 | -2.41 | 1.07 | 1.55 | -- | -4.45 | -0.492 | 7.1 | 21.59 | 1340 | -- | -- |
| 99.97 | 0.466 | 11.5 | -1.17 | 1.1 | 1.81 | -- | -- | -0.151 | 7.36 | 12.04 | 1192 | -- | -- |
| 147.04 | 0.565 | 11.7 | -2.39 | -- | 1.59 | -- | -4.34 | -0.493 | -- | 21.5 | 1355 | -- | -- |
| 151 | 0.576 | 11.5 | -0.643 | 1.11 | -- | 0.78 | -- | 0.169 | 6.56 | -- | -- | -- | -- |
| 152.51 | 0.578 | 11.5 | -0.632 | 1.11 | -- | -- | -- | 0.167 | 6.6 | -- | -- | -- | -- |
| 159 | 0.587 | 11.6 | -1.18 | -- | 1.83 | -- | -- | -0.147 | -- | 8.595 | 1355 | -- | -- |
| 131.57 | 0.534 | 11.5 | -- | 1.14 | 1.36 | -- | -- | 0.0412 | 7.27 | 14.56 | 1114 | -- | -- |
| 216.83 | 0.688 | 11.5 | -0.605 | -- | -- | -- | -- | 0.19 | -- | -- | -- | -- | -- |
| 163.03 | 0.597 | 11.5 | -- | 1.1 | -- | -- | -- | 0.238 | 6.64 | -- | -- | -- | -- |
| 191.04 | 0.644 | 11.5 | -- | -- | 1.34 | -- | -- | 0.0585 | -- | 11.21 | 1343 | -- | -- |
| 226.48 | 0.702 | 11.5 | -- | -- | -- | -- | -- | 0.257 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.23 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 2 | 79.53 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 3 | 79.61 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 4 | 79.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 5 | 79.78 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 8 | 79.90 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 12 | 80.17 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 22 | 80.37 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 23 | 80.37 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 28 | 80.48 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 31 | 80.52 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 33 | 80.58 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 37 | 80.65 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 12 |
| 46 | 80.77 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 57 | 80.87 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 145 | 81.97 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 173 | 82.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 200 | 82.55 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 223 | 82.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 243 | 82.89 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 286 | 83.17 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 321 | 83.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 343 | 83.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 424 | 83.96 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 493 | 84.22 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 502 | 84.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 514 | 84.32 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 562 | 84.54 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 595 | 84.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 671 | 84.91 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 707 | 85.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 740 | 85.14 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 797 | 85.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 803 | 85.35 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 826 | 85.42 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 849 | 85.50 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 888 | 85.58 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 905 | 85.62 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 934 | 85.69 | radiation | 10 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 955 | 85.72 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 976 | 85.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 981 | 85.79 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |