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Os01g0897100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.012) R2 : 0.133
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.212 (0.0253) R2dN8 : 0.172 R2N8 : 0.133
σ : 0.227
deviance : 23.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.17 0.177 11.6 -0.513 0.327 0.244 0.463 -2.01 0.0325 4.98 21.4 1961 -- --
16.39 0.189 11.5 0.0211 0.303 0.216 0.609 -- 0.17 4.89 12.64 5450 -- --
14.71 0.179 11.6 -0.531 0.332 0.251 -- -2.07 0.026 4.97 21.5 1957 -- --
17 0.192 11.5 -0.0282 0.31 0.262 -- -- 0.146 4.84 12.6 7808 -- --
19.15 0.205 11.5 -0.109 -- -0.151 -- -1.66 0.183 -- 21.5 1957 -- --
17.37 0.195 11.5 0.107 0.308 -- 0.529 -- 0.219 4.88 -- -- -- --
18.08 0.199 11.5 0.105 0.311 -- -- -- 0.217 4.71 -- -- -- --
21.63 0.218 11.5 0.165 -- -0.253 -- -- 0.264 -- 21.5 1957 -- --
17.01 0.192 11.5 -- 0.306 0.243 -- -- 0.149 4.79 10.5 7801 -- --
23.2 0.225 11.5 0.117 -- -- -- -- 0.225 -- -- -- -- --
18.37 0.2 11.5 -- 0.313 -- -- -- 0.205 4.7 -- -- -- --
21.81 0.218 11.5 -- -- 0.271 -- -- 0.157 -- 7.711 7009 -- --
23.56 0.227 11.5 -- -- -- -- -- 0.212 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.43 temperature 15 270 > th dose dependent rect. 6 18
7 13.61 wind 3 43200 < th dose dependent rect. 20 2
23 13.75 radiation 20 14400 < th dose dependent rect. 24 5
27 13.77 wind 1 43200 < th dose dependent rect. 13 13
32 13.79 radiation 1 14400 < th dose dependent rect. 23 6
33 13.79 wind 1 43200 < th dose dependent rect. 15 11
35 13.80 wind 3 43200 > th dose dependent rect. 16 1
40 13.82 wind 1 43200 < th dose independent rect. 19 7
43 13.83 humidity 70 43200 > th dose independent rect. 8 2
49 13.86 humidity 70 43200 < th dose independent rect. 9 1
50 13.86 humidity 70 43200 < th dose independent rect. 8 3
51 13.86 wind 1 43200 > th dose independent rect. 19 7
59 13.88 wind 1 43200 > th dose independent rect. 21 5
62 13.89 wind 1 43200 < th dose independent rect. 21 5
65 13.89 humidity 60 43200 > th dose independent rect. 19 19
68 13.90 humidity 80 43200 < th dose dependent rect. 18 2
76 13.92 wind 5 43200 < th dose independent rect. 16 1
90 13.94 wind 5 43200 > th dose independent rect. 16 1
96 13.94 humidity 90 14400 > th dose dependent rect. 2 1
101 13.95 humidity 90 14400 > th dose dependent rect. 2 5
102 13.95 humidity 90 14400 > th dose dependent rect. 24 6
105 13.96 humidity 60 43200 > th dose independent rect. 11 2
117 13.97 radiation 10 43200 > th dose independent rect. 6 1
145 13.98 humidity 60 43200 > th dose independent rect. 3 11
149 13.98 humidity 60 43200 < th dose independent rect. 19 19
156 13.99 wind 1 43200 < th dose independent rect. 19 3
168 14.00 wind 1 43200 < th dose independent rect. 17 9
188 14.01 humidity 60 43200 > th dose independent rect. 11 19
193 14.01 wind 1 43200 < th dose dependent sin 17 NA
203 14.02 wind 1 43200 > th dose independent rect. 21 1
204 14.02 wind 1 43200 < th dose independent rect. 21 1
215 14.02 humidity 60 43200 > th dose independent rect. 11 17
237 14.03 humidity 60 43200 > th dose independent rect. 11 15
239 14.03 humidity 70 43200 < th dose independent rect. 6 16
245 14.03 humidity 70 43200 < th dose dependent rect. 10 3
251 14.04 humidity 80 43200 > th dose independent rect. 19 4
252 14.04 wind 5 43200 < th dose independent rect. 15 5
283 14.05 wind 9 43200 < th dose independent rect. 18 3
284 14.05 wind 5 43200 > th dose independent rect. 15 4
308 14.05 humidity 70 43200 < th dose dependent rect. 12 1
326 14.05 humidity 70 43200 < th dose dependent rect. 9 12
339 14.06 humidity 60 43200 > th dose independent sin 5 NA
340 14.06 humidity 60 43200 > th dose independent no NA NA
341 14.06 humidity 70 43200 < th dose independent sin 2 NA
343 14.06 radiation 20 43200 > th dose independent rect. 9 1
344 14.06 humidity 70 43200 > th dose independent rect. 18 2
345 14.06 wind 9 43200 > th dose independent rect. 18 3
374 14.06 humidity 60 43200 > th dose independent rect. 3 23
389 14.06 humidity 70 43200 < th dose dependent rect. 10 10
408 14.07 wind 1 43200 > th dose independent rect. 17 9
411 14.07 humidity 60 43200 < th dose independent rect. 24 14
415 14.07 humidity 70 43200 < th dose independent rect. 20 15
425 14.07 humidity 60 43200 > th dose independent rect. 3 21
443 14.07 humidity 70 43200 < th dose dependent sin 19 NA
483 14.07 humidity 70 43200 < th dose dependent rect. 17 21
484 14.08 humidity 60 43200 > th dose independent sin 15 NA
489 14.08 humidity 60 43200 < th dose independent rect. 12 1
490 14.08 humidity 80 43200 > th dose independent rect. 20 2
497 14.08 humidity 50 43200 > th dose independent rect. 17 6
518 14.08 humidity 60 43200 < th dose independent rect. 12 18
596 14.09 radiation 20 43200 > th dose independent rect. 8 3
638 14.09 wind 9 43200 > th dose dependent rect. 18 3
660 14.09 radiation 10 14400 > th dose dependent rect. 17 14
683 14.10 wind 1 43200 > th dose independent rect. 19 1
685 14.10 humidity 50 43200 < th dose independent rect. 16 1
729 14.10 radiation 20 43200 < th dose dependent rect. 8 1
733 14.10 radiation 1 43200 < th dose dependent rect. 3 2
780 14.11 humidity 60 43200 < th dose independent sin 15 NA
781 14.11 humidity 70 43200 < th dose independent sin 21 NA
789 14.11 humidity 70 43200 < th dose independent rect. 17 5
827 14.11 humidity 60 43200 < th dose independent rect. 12 14
830 14.11 humidity 70 43200 > th dose independent rect. 7 15
867 14.11 temperature 20 720 > th dose dependent sin 3 NA
869 14.11 humidity 90 14400 > th dose dependent rect. 5 1
925 14.12 humidity 50 43200 > th dose independent rect. 16 1
926 14.12 radiation 1 43200 < th dose independent rect. 18 1
929 14.12 humidity 70 43200 < th dose independent rect. 18 2
983 14.12 humidity 70 43200 < th dose dependent no NA NA
985 14.12 radiation 10 14400 > th dose dependent rect. 6 1