Os01g0894000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallophosphoesterase domain containing protein.
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Os01g0894000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallophosphoesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.02 | 0.244 | 9.05 | 0.281 | 0.545 | 1.01 | 0.463 | -0.543 | -0.00345 | 9.41 | 9.929 | 710 | -- | -- |
| 27.21 | 0.243 | 9.04 | 0.377 | 0.55 | 1.02 | 0.56 | -- | 0.0222 | 9.25 | 7.375 | 669 | -- | -- |
| 27.49 | 0.246 | 9.04 | 0.45 | 0.36 | 1.17 | -- | 0.217 | 0.0198 | 5.91 | 9.929 | 710 | -- | -- |
| 27.5 | 0.246 | 9.05 | 0.421 | 0.359 | 1.18 | -- | -- | 0.0118 | 5.91 | 14.4 | 24 | -- | -- |
| 33.52 | 0.271 | 9.05 | 0.483 | -- | 0.956 | -- | 0.0961 | 0.0525 | -- | 9.929 | 710 | -- | -- |
| 39.82 | 0.296 | 9.01 | 0.629 | 0.316 | -- | 0.523 | -- | 0.177 | 10.3 | -- | -- | -- | -- |
| 40.86 | 0.299 | 9.01 | 0.648 | 0.317 | -- | -- | -- | 0.177 | 9.86 | -- | -- | -- | -- |
| 33.5 | 0.271 | 9.05 | 0.47 | -- | 0.962 | -- | -- | 0.0489 | -- | 14.4 | 19 | -- | -- |
| 31.4 | 0.261 | 9.06 | -- | 0.416 | 1.4 | -- | -- | -0.0622 | 5.52 | 13.58 | 21 | -- | -- |
| 46.89 | 0.32 | 9.02 | 0.645 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 51.92 | 0.337 | 9.03 | -- | 0.316 | -- | -- | -- | 0.105 | 9.7 | -- | -- | -- | -- |
| 39 | 0.292 | 9.06 | -- | -- | 1.11 | -- | -- | -0.0199 | -- | 13.97 | 13 | -- | -- |
| 57.85 | 0.355 | 9.03 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 2 | 25.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 23 | 26.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 20 |
| 26 | 26.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 51 | 26.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 62 | 26.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 69 | 26.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 88 | 26.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 120 | 26.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 19 |
| 128 | 27.03 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 145 | 27.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 14 |
| 195 | 27.36 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 206 | 27.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 274 | 27.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 282 | 27.63 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 294 | 27.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 297 | 27.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 340 | 27.69 | temperature | 10 | 1440 | > th | dose dependent | sin | 3 | NA |
| 442 | 27.78 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 831 | 27.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 848 | 27.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 874 | 27.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 878 | 27.98 | temperature | 30 | 1440 | < th | dose dependent | sin | 2 | NA |
| 900 | 27.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 941 | 28.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 943 | 28.01 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |