Os01g0891300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Allyl alcohol dehydrogenase.
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Os01g0891300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Allyl alcohol dehydrogenase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 375.95 | 0.911 | 8.43 | -4.63 | 2.58 | -2.73 | 2.56 | -1.43 | -1.22 | 8.81 | 73 | 1242 | -- | -- |
| 380.54 | 0.909 | 8.44 | -4.76 | 2.58 | -2.74 | 2.62 | -- | -1.25 | 8.75 | 73 | 1237 | -- | -- |
| 397.28 | 0.928 | 8.43 | -4.61 | 2.57 | -2.72 | -- | -0.915 | -1.24 | 8.8 | 72.86 | 1242 | -- | -- |
| 398.97 | 0.93 | 8.45 | -4.76 | 2.59 | -2.78 | -- | -- | -1.28 | 8.82 | 72.99 | 1237 | -- | -- |
| 699.95 | 1.23 | 8.5 | -4.53 | -- | -2.71 | -- | -0.964 | -1.24 | -- | 75 | 1420 | -- | -- |
| 645.58 | 1.19 | 8.38 | -4.28 | 2.36 | -- | 2.24 | -- | -0.923 | 7.91 | -- | -- | -- | -- |
| 660.31 | 1.2 | 8.38 | -4.22 | 2.36 | -- | -- | -- | -0.925 | 7.91 | -- | -- | -- | -- |
| 704.13 | 1.24 | 8.52 | -4.62 | -- | -2.8 | -- | -- | -1.27 | -- | 74.32 | 1415 | -- | -- |
| 964.84 | 1.45 | 8.45 | -- | 2.43 | -2.72 | -- | -- | -1.21 | 8.27 | 72.57 | 8422 | -- | -- |
| 963.65 | 1.45 | 8.44 | -4.19 | -- | -- | -- | -- | -0.894 | -- | -- | -- | -- | -- |
| 1129.68 | 1.57 | 8.27 | -- | 2.33 | -- | -- | -- | -0.455 | 8.04 | -- | -- | -- | -- |
| 1031.07 | 1.5 | 8.36 | -- | -- | -4.33 | -- | -- | -0.563 | -- | 64.81 | 28830 | -- | -- |
| 1427.76 | 1.76 | 8.33 | -- | -- | -- | -- | -- | -0.428 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 386.44 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 26 | 389.97 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 28 | 390.19 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 69 | 392.12 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 129 | 394.64 | humidity | 90 | 1440 | < th | dose dependent | sin | 21 | NA |
| 141 | 395.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 212 | 397.71 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 273 | 399.81 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 283 | 400.05 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 287 | 400.26 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 339 | 401.42 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 413 | 402.23 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 441 | 402.70 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 473 | 403.37 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 537 | 404.55 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 542 | 404.62 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 570 | 405.24 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 636 | 406.27 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 649 | 406.49 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 695 | 407.67 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 726 | 408.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 727 | 408.41 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 20 |
| 755 | 409.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 778 | 409.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 808 | 410.33 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 815 | 410.46 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 902 | 411.75 | humidity | 70 | 1440 | > th | dose independent | sin | 12 | NA |
| 928 | 412.31 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 940 | 412.54 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 951 | 412.59 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 969 | 412.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 23 | 22 |
| 999 | 412.75 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |