Os01g0890600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os01g0890600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.51 | 0.507 | 8.62 | -0.436 | 2.91 | -2.66 | -0.659 | 1.68 | -0.236 | 0.664 | 29.88 | 237 | 4.56 | -- |
| 118.79 | 0.508 | 8.61 | -0.213 | 2.72 | -2.51 | 0.135 | -- | -0.211 | 0.358 | 28.06 | 190 | 4.16 | -- |
| 117.21 | 0.504 | 8.61 | -0.36 | 2.84 | -2.61 | -- | 1.07 | -0.224 | 0.68 | 29.52 | 236 | 4.35 | -- |
| 117.6 | 0.505 | 8.62 | -0.252 | 2.39 | -2.24 | -- | -- | -0.211 | 23.7 | 25.8 | 251 | 5.03 | -- |
| 153.72 | 0.577 | 8.53 | -0.0827 | -- | -2.76 | -- | -0.531 | -0.012 | -- | 67.69 | 1021 | 3.82 | -- |
| 168.13 | 0.608 | 8.54 | 0.097 | 2.04 | -- | 0.141 | -- | 0.14 | 22.8 | -- | -- | -- | -- |
| 168.21 | 0.607 | 8.54 | 0.0915 | 2.04 | -- | -- | -- | 0.139 | 22.7 | -- | -- | -- | -- |
| 149.49 | 0.569 | 8.55 | -0.318 | -- | -2.99 | -- | -- | -0.094 | -- | 108.6 | 1265 | 6.03 | -- |
| 119.16 | 0.508 | 8.61 | -- | 2.38 | -2.19 | -- | -- | -0.173 | 23.6 | 25.75 | 241 | 5.06 | -- |
| 425.89 | 0.964 | 8.49 | 0.132 | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
| 168.43 | 0.607 | 8.54 | -- | 2.04 | -- | -- | -- | 0.129 | 22.8 | -- | -- | -- | -- |
| 149.26 | 0.569 | 8.53 | -- | -- | -2.8 | -- | -- | -0.055 | -- | 282.1 | 1364 | 6.75 | -- |
| 426.35 | 0.964 | 8.49 | -- | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.52 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 5 | 116.26 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 7 |
| 10 | 116.91 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 11 | 116.94 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 98 | 120.69 | temperature | 20 | 90 | < th | dose independent | sin | 9 | NA |
| 143 | 122.00 | temperature | 20 | 10 | < th | dose independent | sin | 9 | NA |
| 170 | 122.53 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 11 |
| 250 | 123.59 | temperature | 20 | 90 | > th | dose independent | sin | 10 | NA |
| 297 | 124.21 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 12 |
| 322 | 124.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 345 | 124.81 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 13 |
| 425 | 125.73 | temperature | 20 | 10 | > th | dose independent | sin | 9 | NA |
| 445 | 125.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 480 | 126.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 514 | 126.75 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 11 |
| 566 | 127.14 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 15 |
| 700 | 128.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 803 | 129.84 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 5 |
| 809 | 129.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 822 | 130.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 903 | 130.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 913 | 130.83 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 12 |
| 916 | 130.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 4 |