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Os01g0888800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.18 (0.0475) R2 : 0.533
β1 : -0.471 (0.172) R2dD : 0.0081 R2D : 0.0132
β2 : 7.19 (0.84) R2dC : 3.63 R2C : -5.82
β3 : 10.7 (0.956) R2dE : 6.24 R2E : -3.22
β4 : -14.7 (3.37) R2dD*C : 0.732 R2D*C : -0.741
β5 : -17.5 (3.85) R2dD*E : 0.795 R2D*E : -0.78
γ1 : 0.996 (0.105) R2dN8 : 0.137 R2N8 : 0.0416
σ : 0.88
deviance : 350.44
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C
peak time of C : 17.1
E
wheather : radiation
threshold : 34.71
memory length : 823
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 8.52
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
350.44 0.88 7.18 -0.471 7.19 10.7 -14.7 -17.5 0.996 17.1 34.71 823 8.52 --
372.95 0.899 7.16 -0.679 6.01 9.45 1.1 -- 0.956 15.8 87.97 944 10.3 --
405.43 0.938 7.28 -0.786 4.33 8.8 -- -1.44 0.407 17.3 9.999 858 9.71 --
364.32 0.889 7.14 -0.517 4.58 8.17 -- -- 0.883 16.4 24.55 814 9.31 --
684.95 1.23 7.14 -0.61 -- -0.328 -- -1.11 0.661 -- 9.999 858 9.71 --
455.71 1 7.12 -0.695 2.14 -- -0.361 -- 0.606 4.79 -- -- -- --
456.04 1 7.12 -0.693 2.14 -- -- -- 0.608 4.81 -- -- -- --
384.83 0.914 7.04 -0.317 -- 3.47 -- -- 1.02 -- 50 1068 11.5 --
369.96 0.896 7.1 -- 4.55 8.18 -- -- 1.01 16.1 30.01 829 9.69 --
697.56 1.23 7.14 -0.614 -- -- -- -- 0.663 -- -- -- -- --
468.71 1.01 7.1 -- 2.13 -- -- -- 0.685 4.82 -- -- -- --
384.84 0.914 7.06 -- -- 3.72 -- -- 0.993 -- 27.33 1009 11.8 --
707.49 1.24 7.12 -- -- -- -- -- 0.731 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 352.38 radiation 10 720 < th dose independent rect. 16 1
2 353.54 radiation 10 720 < th dose independent rect. 14 4
3 355.50 radiation 10 720 < th dose independent rect. 14 9
5 357.11 radiation 10 720 < th dose independent rect. 14 16
10 361.05 radiation 10 720 < th dose independent sin 14 NA
16 363.34 radiation 10 720 < th dose independent rect. 14 11
27 365.77 radiation 20 720 < th dose dependent rect. 14 9
33 366.82 radiation 20 720 < th dose dependent sin 14 NA
34 366.99 radiation 10 720 < th dose dependent rect. 14 4
37 367.69 humidity 70 720 > th dose independent sin 13 NA
46 369.20 radiation 20 720 < th dose dependent rect. 14 17
55 370.45 humidity 70 720 > th dose independent rect. 14 15
58 370.55 humidity 70 720 > th dose independent rect. 14 7
61 370.85 humidity 70 720 > th dose independent rect. 16 15
74 371.42 radiation 20 720 < th dose dependent rect. 14 7
84 371.89 radiation 10 720 < th dose dependent rect. 9 9
87 372.11 humidity 70 720 > th dose independent rect. 16 13
88 372.13 humidity 70 720 > th dose independent rect. 16 4
89 372.14 radiation 20 720 < th dose dependent rect. 14 11
101 372.55 radiation 20 720 < th dose dependent rect. 14 13
121 373.16 humidity 70 720 < th dose independent sin 14 NA
124 373.20 radiation 30 1440 < th dose dependent rect. 7 17
127 373.22 radiation 30 1440 < th dose dependent rect. 7 20
128 373.24 radiation 30 1440 < th dose dependent rect. 7 11
129 373.25 radiation 30 1440 < th dose dependent rect. 7 14
134 373.27 humidity 70 720 < th dose independent rect. 14 18
155 373.47 radiation 30 1440 < th dose dependent rect. 11 23
166 373.86 radiation 30 1440 < th dose dependent sin 0 NA
197 374.12 radiation 30 1440 < th dose dependent rect. 15 23
208 374.14 radiation 30 1440 < th dose dependent rect. 2 22
210 374.14 radiation 30 1440 < th dose dependent rect. 20 22
228 374.17 radiation 30 1440 < th dose dependent rect. 22 20
231 374.18 radiation 30 1440 < th dose dependent rect. 2 16
240 374.18 radiation 30 1440 < th dose dependent rect. 22 23
241 374.19 radiation 30 1440 < th dose dependent no NA NA
318 374.31 radiation 20 1440 < th dose independent rect. 11 22
333 374.45 humidity 70 720 < th dose independent rect. 14 6
399 374.90 radiation 20 1440 < th dose independent rect. 7 10
470 374.99 humidity 50 720 > th dose dependent rect. 15 6
481 375.05 radiation 20 1440 < th dose independent rect. 7 17
482 375.05 radiation 20 1440 < th dose independent rect. 7 23
491 375.08 radiation 20 1440 < th dose independent rect. 7 20
494 375.09 radiation 20 1440 < th dose independent rect. 7 14
498 375.10 humidity 70 720 > th dose independent sin 16 NA
502 375.11 radiation 20 1440 < th dose independent rect. 7 12
510 375.19 radiation 20 1440 < th dose independent rect. 15 23
608 375.54 radiation 20 1440 < th dose independent rect. 18 23
615 375.55 radiation 20 1440 < th dose independent rect. 20 21
625 375.57 radiation 20 1440 < th dose independent rect. 4 13
626 375.57 radiation 20 1440 < th dose independent rect. 2 15
631 375.58 radiation 20 1440 < th dose independent rect. 22 19
651 375.74 radiation 20 1440 < th dose independent rect. 4 20
652 375.74 radiation 20 1440 < th dose independent rect. 2 22
667 375.77 radiation 20 1440 < th dose independent rect. 4 23
670 375.78 radiation 20 1440 < th dose independent rect. 4 17
673 375.78 radiation 20 1440 < th dose independent rect. 2 19
681 375.79 radiation 20 1440 < th dose independent no NA NA
687 375.79 radiation 20 1440 < th dose independent rect. 22 23
756 375.89 radiation 20 1440 < th dose independent sin 0 NA
781 375.99 radiation 1 1440 > th dose dependent rect. 11 23
786 376.02 radiation 20 1440 > th dose independent rect. 11 23
827 376.45 radiation 1 1440 > th dose dependent rect. 6 12
847 376.52 humidity 80 720 < th dose dependent rect. 14 7
866 376.57 radiation 20 1440 > th dose independent rect. 15 23
963 376.99 radiation 1 1440 > th dose dependent no NA NA