Os01g0888200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0888200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.32 | 0.456 | 11.3 | -0.392 | 1.69 | 0.798 | -0.15 | 1.82 | -0.876 | 18.9 | 0.1397 | 100 | -- | -- |
| 101.31 | 0.469 | 11.3 | -0.363 | 1.69 | 0.729 | -0.44 | -- | -0.872 | 18.8 | -3.344 | 112 | -- | -- |
| 94.38 | 0.452 | 11.3 | -0.393 | 1.69 | 0.801 | -- | 1.85 | -0.878 | 18.9 | 0.1161 | 100 | -- | -- |
| 101.78 | 0.47 | 11.3 | -0.355 | 1.69 | 0.688 | -- | -- | -0.871 | 18.7 | -3.233 | 112 | -- | -- |
| 157.68 | 0.585 | 11.3 | -0.491 | -- | 1.73 | -- | 0.0486 | -0.982 | -- | -42.52 | 695 | -- | -- |
| 107.46 | 0.486 | 11.3 | -0.35 | 1.76 | -- | -0.102 | -- | -0.834 | 17.9 | -- | -- | -- | -- |
| 107.48 | 0.485 | 11.3 | -0.349 | 1.76 | -- | -- | -- | -0.834 | 17.9 | -- | -- | -- | -- |
| 157.31 | 0.584 | 11.3 | -0.488 | -- | 1.74 | -- | -- | -1.04 | -- | -31.41 | 717 | -- | -- |
| 105.1 | 0.477 | 11.3 | -- | 1.69 | 0.682 | -- | -- | -0.831 | 18.7 | -4.668 | 112 | -- | -- |
| 267.2 | 0.764 | 11.3 | -0.403 | -- | -- | -- | -- | -0.875 | -- | -- | -- | -- | -- |
| 110.7 | 0.492 | 11.3 | -- | 1.76 | -- | -- | -- | -0.795 | 17.9 | -- | -- | -- | -- |
| 163.58 | 0.596 | 11.3 | -- | -- | 1.72 | -- | -- | -0.987 | -- | -57.45 | 717 | -- | -- |
| 271.47 | 0.769 | 11.3 | -- | -- | -- | -- | -- | -0.83 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.31 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 7 | 83.00 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 10 | 83.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 11 | 83.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 14 | 84.32 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 35 | 85.30 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 37 | 85.48 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 11 |
| 38 | 85.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 44 | 85.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 45 | 85.85 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 47 | 85.85 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 51 | 85.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 59 | 86.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 60 | 86.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 61 | 86.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 62 | 86.15 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 73 | 86.41 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 83 | 86.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 89 | 86.63 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 101 | 86.84 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 110 | 87.14 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 111 | 87.14 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 113 | 87.14 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 122 | 87.26 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 128 | 87.34 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 130 | 87.35 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 142 | 87.44 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 143 | 87.45 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 152 | 87.50 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 18 |
| 156 | 87.54 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 159 | 87.56 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 170 | 87.67 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 179 | 87.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 180 | 87.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 193 | 87.79 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 195 | 87.84 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 198 | 87.87 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 201 | 87.89 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 202 | 87.89 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 214 | 87.95 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 221 | 87.98 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 11 |
| 230 | 88.03 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 232 | 88.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 233 | 88.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 234 | 88.04 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 237 | 88.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 241 | 88.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 244 | 88.09 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 247 | 88.09 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 249 | 88.09 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 251 | 88.09 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 255 | 88.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 260 | 88.11 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 264 | 88.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 289 | 88.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 292 | 88.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 295 | 88.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 296 | 88.21 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 297 | 88.21 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 313 | 88.24 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 332 | 88.26 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 336 | 88.26 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 22 | 17 |
| 338 | 88.27 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 340 | 88.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 342 | 88.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 343 | 88.29 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 345 | 88.30 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 350 | 88.34 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 351 | 88.34 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 374 | 88.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 375 | 88.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 379 | 88.38 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 389 | 88.42 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 393 | 88.45 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 414 | 88.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 435 | 88.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 437 | 88.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 441 | 88.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 13 |
| 450 | 88.70 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 466 | 88.74 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 471 | 88.76 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 472 | 88.76 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 478 | 88.81 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 492 | 88.92 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 508 | 88.94 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 515 | 88.96 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 534 | 89.02 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 535 | 89.02 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 586 | 89.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 589 | 89.19 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 592 | 89.19 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 593 | 89.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 595 | 89.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 601 | 89.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 602 | 89.19 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 622 | 89.25 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 633 | 89.29 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 641 | 89.32 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 648 | 89.37 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 674 | 89.44 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 681 | 89.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 685 | 89.46 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 20 |
| 698 | 89.49 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 711 | 89.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 734 | 89.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 830 | 89.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 831 | 89.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 836 | 89.78 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 13 |
| 845 | 89.79 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 855 | 89.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 858 | 89.83 | temperature | 10.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 951 | 90.02 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 976 | 90.05 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 983 | 90.06 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 999 | 90.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |