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Os01g0886900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0201) R2 : 0.939
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.63 (0.0542) R2dC : 0.715 R2C : 0.875
β3 : -1.25 (0.0617) R2dE : 0.0629 R2E : 0.226
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.133 (0.0422) R2dN8 : 0.00109 R2N8 : -0.00524
σ : 0.376
deviance : 65.31
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_____
C
peak time of C : 9.03
E
wheather : radiation
threshold : 13.02
memory length : 8
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.99
open length of G : 13

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
64.69 0.378 12.8 -0.185 3.67 -1.19 0.0517 0.304 -0.131 9.05 16.34 9 7 13
64.84 0.375 12.8 -0.193 3.66 -1.16 0.0756 -- -0.133 9.04 15.59 8 6.98 13
64.31 0.373 12.8 -0.208 3.64 -1.24 -- 0.335 -0.128 9.06 13.18 8 6.98 13
64.5 0.374 12.8 -0.19 3.63 -1.24 -- -- -0.133 9.04 13.31 8 7 13
216.99 0.686 13 -0.203 -- -3.08 -- 0.331 -0.193 -- 17.57 4 12.5 13.5
108.88 0.489 12.7 -0.175 4.13 -- 0.163 -- -0.104 8.6 -- -- -- --
108.97 0.489 12.7 -0.17 4.13 -- -- -- -0.104 8.6 -- -- -- --
177.65 0.621 12.9 -0.207 -- -2.98 -- -- -0.249 -- 47.59 3 12.5 13.5
65.31 0.376 12.8 -- 3.63 -1.25 -- -- -0.133 9.03 13.02 8 6.99 13
1066.89 1.53 12.8 -0.157 -- -- -- -- -0.0676 -- -- -- -- --
109.73 0.49 12.7 -- 4.13 -- -- -- -0.0856 8.6 -- -- -- --
179.92 0.625 12.9 -- -- -2.98 -- -- -0.249 -- 47.59 3 12.5 13.5
1067.54 1.53 12.8 -- -- -- -- -- -0.0502 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.11 radiation 20.0 10 < th dose dependent rect. 7 13
4 68.59 radiation 20.0 10 < th dose dependent rect. 12 8
6 68.97 atmosphere 995.0 10 > th dose dependent rect. 16 4
7 69.11 wind 3.0 270 > th dose independent rect. 15 2
8 69.15 radiation 10.0 10 < th dose independent rect. 13 7
13 69.65 atmosphere 995.0 10 > th dose independent rect. 16 4
15 69.67 radiation 10.0 10 < th dose independent rect. 16 4
16 69.70 precipitation 0.1 10 < th dose independent rect. 16 4
17 69.70 precipitation 0.1 10 < th dose dependent rect. 16 4
18 69.74 radiation 40.0 10 < th dose dependent rect. 16 4
23 70.00 humidity 50.0 10 > th dose independent rect. 16 4
26 70.12 wind 9.0 10 < th dose independent rect. 16 4
34 70.32 radiation 10.0 10 < th dose independent rect. 7 13
37 70.41 radiation 30.0 10 < th dose independent rect. 16 4
38 70.42 atmosphere 995.0 270 > th dose dependent rect. 15 2
40 70.45 precipitation 0.1 10 < th dose independent rect. 20 20
41 70.45 precipitation 0.1 10 < th dose dependent rect. 20 20
43 70.50 wind 1.0 10 > th dose independent rect. 16 4
44 70.51 temperature 10.0 10 > th dose independent rect. 16 4
46 70.51 atmosphere 1010.0 10 < th dose independent rect. 16 4
49 70.51 temperature 10.0 10 > th dose independent rect. 20 20
54 70.68 radiation 10.0 10 < th dose independent rect. 10 10
55 70.81 radiation 10.0 10 < th dose dependent sin 22 NA
73 71.27 wind 3.0 270 > th dose independent rect. 14 5
74 71.28 radiation 40.0 270 < th dose independent rect. 15 2
77 71.40 wind 9.0 270 < th dose independent rect. 15 2
78 71.41 wind 1.0 270 > th dose dependent rect. 15 2
79 71.47 radiation 1.0 90 > th dose independent rect. 9 7
82 71.50 temperature 10.0 10 > th dose dependent rect. 16 4
83 71.56 temperature 20.0 270 > th dose independent rect. 15 2
91 71.70 wind 9.0 10 < th dose independent rect. 20 20
94 71.73 temperature 10.0 1440 > th dose independent rect. 17 4
97 71.73 radiation 30.0 1440 < th dose independent rect. 17 4
103 71.73 temperature 10.0 1440 > th dose independent rect. 21 20
107 71.77 precipitation 0.1 270 < th dose independent rect. 15 3
109 71.77 precipitation 0.1 270 < th dose dependent rect. 15 3
111 71.84 precipitation 0.1 270 < th dose independent rect. 19 19
112 71.84 precipitation 0.1 270 < th dose dependent rect. 19 19
113 71.85 precipitation 0.1 270 < th dose independent rect. 18 21
114 71.85 precipitation 0.1 270 < th dose dependent rect. 18 21
115 71.87 temperature 10.0 270 > th dose independent rect. 15 2
117 71.87 atmosphere 1010.0 270 < th dose independent rect. 15 2
119 71.87 temperature 10.0 270 > th dose independent rect. 17 22
120 71.88 atmosphere 995.0 10 > th dose independent rect. 20 20
122 71.91 wind 9.0 270 < th dose independent rect. 14 5
124 71.97 precipitation 0.1 270 < th dose independent rect. 14 5
125 71.97 precipitation 0.1 270 < th dose dependent rect. 14 5
128 72.04 humidity 90.0 270 < th dose independent rect. 15 2
132 72.15 atmosphere 995.0 270 > th dose independent rect. 15 2
135 72.20 radiation 40.0 270 < th dose independent rect. 14 5
143 72.30 temperature 10.0 270 > th dose independent rect. 14 5
145 72.30 atmosphere 1010.0 270 < th dose independent rect. 14 5
147 72.30 temperature 10.0 270 > th dose independent rect. 19 19
148 72.30 atmosphere 995.0 270 > th dose independent rect. 19 19
149 72.31 atmosphere 995.0 270 > th dose dependent rect. 14 5
154 72.37 radiation 1.0 10 > th dose independent rect. 10 6
155 72.40 temperature 30.0 270 < th dose independent rect. 18 9
174 72.76 atmosphere 995.0 270 > th dose independent rect. 14 5
175 72.78 temperature 10.0 270 > th dose dependent rect. 16 1
178 72.81 radiation 40.0 10 < th dose dependent rect. 16 18
188 73.01 humidity 90.0 270 < th dose independent rect. 14 5
190 73.08 humidity 70.0 270 > th dose independent rect. 18 9
193 73.15 temperature 10.0 270 > th dose dependent rect. 15 3
194 73.18 radiation 40.0 270 < th dose independent rect. 14 18
200 73.26 wind 1.0 270 > th dose dependent rect. 14 5
202 73.29 wind 9.0 270 < th dose independent rect. 19 19
207 73.35 wind 9.0 270 < th dose independent rect. 14 18
212 73.42 atmosphere 995.0 270 > th dose independent rect. 18 21
219 73.52 precipitation 0.1 270 < th dose independent rect. 8 6
220 73.52 precipitation 0.1 270 < th dose dependent rect. 8 6
226 73.59 radiation 1.0 270 < th dose dependent rect. 18 9
228 73.66 temperature 10.0 270 > th dose independent rect. 8 6
229 73.66 atmosphere 995.0 270 > th dose independent rect. 8 6
230 73.66 atmosphere 1015.0 270 < th dose independent rect. 8 6
231 73.66 temperature 10.0 270 > th dose independent rect. 14 18
232 73.68 wind 9.0 270 < th dose independent rect. 18 21
236 73.80 radiation 1.0 270 < th dose independent rect. 18 9
243 73.90 temperature 10.0 270 > th dose dependent rect. 14 5
255 74.17 radiation 10.0 10 > th dose independent sin 20 NA
264 74.22 humidity 50.0 270 > th dose independent rect. 19 19
268 74.27 wind 9.0 270 < th dose independent rect. 3 16
274 74.34 radiation 1.0 270 > th dose independent rect. 7 8
276 74.35 atmosphere 995.0 270 > th dose independent rect. 14 18
283 74.45 wind 9.0 270 < th dose independent rect. 8 6
287 74.52 radiation 10.0 10 < th dose independent sin 20 NA
291 74.56 precipitation 0.1 270 < th dose independent rect. 14 18
292 74.56 precipitation 0.1 270 < th dose dependent rect. 14 18
302 74.63 atmosphere 995.0 90 > th dose independent rect. 16 17
340 74.96 humidity 90.0 10 < th dose independent rect. 16 4
360 75.10 atmosphere 1015.0 10 < th dose independent rect. 20 20
373 75.20 wind 9.0 90 < th dose independent rect. 16 17
383 75.27 temperature 10.0 270 > th dose independent rect. 19 8
386 75.27 atmosphere 995.0 270 > th dose independent rect. 19 8
392 75.27 temperature 10.0 270 > th dose independent rect. 3 16
393 75.27 atmosphere 1015.0 270 < th dose independent rect. 3 16
408 75.37 wind 9.0 270 < th dose independent rect. 19 8
431 75.48 temperature 10.0 90 > th dose independent rect. 16 17
434 75.50 humidity 50.0 270 > th dose independent rect. 18 21
441 75.55 radiation 40.0 90 < th dose independent rect. 16 17
442 75.55 atmosphere 995.0 10 > th dose independent rect. 16 18
468 75.67 humidity 50.0 10 > th dose independent rect. 16 18
513 76.02 precipitation 0.1 270 < th dose independent rect. 19 8
514 76.02 precipitation 0.1 270 < th dose dependent rect. 19 8
516 76.03 humidity 50.0 30 > th dose independent rect. 20 20
533 76.07 precipitation 0.1 90 < th dose independent rect. 16 17
534 76.07 precipitation 0.1 90 < th dose dependent rect. 16 17
545 76.13 humidity 50.0 270 > th dose independent rect. 8 6
562 76.22 precipitation 0.1 270 < th dose independent rect. 3 16
564 76.22 precipitation 0.1 270 < th dose dependent rect. 3 16
568 76.25 radiation 40.0 10 < th dose independent rect. 16 18
578 76.28 wind 9.0 10 < th dose independent rect. 16 18
588 76.32 wind 9.0 30 < th dose dependent rect. 16 4
589 76.33 temperature 10.0 10 > th dose independent rect. 10 6
591 76.33 atmosphere 1015.0 10 < th dose independent rect. 10 6
592 76.33 precipitation 0.1 10 < th dose independent rect. 10 6
593 76.33 temperature 10.0 10 > th dose independent rect. 16 18
594 76.33 precipitation 0.1 10 < th dose dependent rect. 10 6
596 76.35 wind 1.0 270 > th dose independent rect. 8 6
639 76.44 radiation 1.0 270 > th dose dependent rect. 16 1
646 76.47 radiation 1.0 270 > th dose independent rect. 15 15
651 76.49 wind 1.0 270 > th dose independent rect. 19 8
669 76.65 atmosphere 995.0 270 > th dose independent rect. 3 16
700 76.81 radiation 1.0 270 > th dose independent rect. 16 1
753 77.10 atmosphere 1015.0 270 < th dose independent rect. 19 19
768 77.21 wind 9.0 10 < th dose independent rect. 10 6
833 77.56 radiation 1.0 270 < th dose dependent sin 13 NA
837 77.60 radiation 1.0 270 > th dose dependent rect. 16 13
859 77.66 radiation 1.0 270 > th dose dependent rect. 16 3
884 77.75 temperature 10.0 1440 > th dose independent rect. 11 6
889 77.75 temperature 10.0 1440 > th dose independent rect. 17 18
901 77.82 atmosphere 995.0 10 > th dose independent rect. 10 6
921 77.98 radiation 1.0 270 > th dose independent rect. 15 4