Os01g0884300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os01g0884300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.44 | 0.299 | 14.3 | 0.946 | 0.349 | 0.372 | -0.029 | 1.51 | 0.138 | 19.4 | 29.99 | 24973 | -- | -- |
| 44.94 | 0.312 | 14.3 | 1.12 | 0.354 | 0.373 | -0.11 | -- | 0.182 | 19.4 | 25.83 | 18109 | -- | -- |
| 40.32 | 0.296 | 14.3 | 0.939 | 0.35 | 0.394 | -- | 1.52 | 0.14 | 19.3 | 19.97 | 24962 | -- | -- |
| 44.71 | 0.311 | 14.3 | 1.13 | 0.376 | 0.416 | -- | -- | 0.177 | 19.5 | 24.96 | 18170 | -- | -- |
| 46.47 | 0.318 | 14.3 | 0.94 | -- | 0.389 | -- | 1.49 | 0.136 | -- | 18.83 | 24666 | -- | -- |
| 51.71 | 0.337 | 14.3 | 1.15 | 0.338 | -- | -0.0625 | -- | 0.0445 | 19.3 | -- | -- | -- | -- |
| 51.72 | 0.337 | 14.3 | 1.15 | 0.338 | -- | -- | -- | 0.0444 | 19.3 | -- | -- | -- | -- |
| 50.3 | 0.33 | 14.3 | 1.09 | -- | 0.318 | -- | -- | 0.174 | -- | 6.044 | 25996 | -- | -- |
| 70.13 | 0.39 | 14.3 | -- | 0.359 | 0.727 | -- | -- | 0.0729 | 19.7 | 69.71 | 29625 | -- | -- |
| 57.78 | 0.355 | 14.3 | 1.15 | -- | -- | -- | -- | 0.0387 | -- | -- | -- | -- | -- |
| 86.79 | 0.436 | 14.4 | -- | 0.327 | -- | -- | -- | -0.0841 | 19.6 | -- | -- | -- | -- |
| 76.2 | 0.407 | 14.3 | -- | -- | 0.691 | -- | -- | 0.0733 | -- | 169.3 | 28990 | -- | -- |
| 92.54 | 0.449 | 14.4 | -- | -- | -- | -- | -- | -0.0886 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.34 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 2 | 39.38 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 15 | 39.58 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 11 |
| 24 | 39.64 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 26 | 39.65 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 58 | 40.02 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 62 | 40.05 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 65 | 40.06 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 67 | 40.06 | temperature | 30 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 71 | 40.08 | humidity | 60 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 72 | 40.08 | humidity | 60 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 73 | 40.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 78 | 40.10 | humidity | 60 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 85 | 40.11 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 100 | 40.18 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 101 | 40.18 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 114 | 40.26 | temperature | 30 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 135 | 40.27 | humidity | 70 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 153 | 40.33 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 155 | 40.33 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 165 | 40.36 | humidity | 70 | 43200 | < th | dose independent | sin | 13 | NA |
| 188 | 40.41 | humidity | 70 | 43200 | > th | dose independent | sin | 12 | NA |
| 303 | 40.54 | humidity | 80 | 43200 | < th | dose dependent | sin | 17 | NA |
| 410 | 40.61 | humidity | 90 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 509 | 40.69 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 654 | 40.77 | humidity | 60 | 43200 | > th | dose independent | sin | 19 | NA |
| 672 | 40.78 | humidity | 50 | 43200 | > th | dose dependent | sin | 19 | NA |
| 701 | 40.80 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 728 | 40.81 | temperature | 25 | 43200 | > th | dose dependent | rect. | 20 | 1 |