Os01g0883900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os01g0883900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.55 | 0.478 | 9.35 | 0.337 | 1.18 | 0.82 | -0.915 | -0.603 | 0.188 | 20.2 | 92 | 59 | -- | -- |
| 104.1 | 0.475 | 9.34 | 0.335 | 1.19 | 0.792 | -0.926 | -- | 0.187 | 20.2 | 91.99 | 72 | -- | -- |
| 106.05 | 0.48 | 9.35 | 0.36 | 1.18 | 0.833 | -- | -0.549 | 0.186 | 20.2 | 92.06 | 59 | -- | -- |
| 106.25 | 0.48 | 9.35 | 0.358 | 1.17 | 0.842 | -- | -- | 0.167 | 20.2 | 92.34 | 117 | -- | -- |
| 177.92 | 0.625 | 9.33 | 0.38 | -- | 0.504 | -- | -0.617 | 0.133 | -- | 90.69 | 13 | -- | -- |
| 116.58 | 0.506 | 9.37 | 0.402 | 1.08 | -- | -0.835 | -- | 0.0595 | 21.1 | -- | -- | -- | -- |
| 118.93 | 0.511 | 9.37 | 0.429 | 1.08 | -- | -- | -- | 0.0592 | 21.2 | -- | -- | -- | -- |
| 178.33 | 0.622 | 9.32 | 0.361 | -- | 0.441 | -- | -- | 0.133 | -- | 89 | 5 | -- | -- |
| 109.34 | 0.487 | 9.35 | -- | 1.23 | 0.961 | -- | -- | 0.141 | 20.3 | 92.8 | 120 | -- | -- |
| 186.37 | 0.638 | 9.34 | 0.433 | -- | -- | -- | -- | 0.054 | -- | -- | -- | -- | -- |
| 123.79 | 0.52 | 9.38 | -- | 1.08 | -- | -- | -- | 0.0113 | 21.3 | -- | -- | -- | -- |
| 181.79 | 0.628 | 9.33 | -- | -- | 0.475 | -- | -- | 0.105 | -- | 89.08 | 5 | -- | -- |
| 191.33 | 0.646 | 9.35 | -- | -- | -- | -- | -- | 0.00594 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.41 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 9 | 101.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 21 | 12 |
| 11 | 101.35 | radiation | 20 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 14 | 101.57 | humidity | 70 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 20 | 101.76 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 21 | 101.78 | temperature | 25 | 30 | < th | dose independent | sin | 8 | NA |
| 27 | 101.82 | radiation | 20 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 37 | 102.07 | wind | 1 | 14400 | < th | dose dependent | sin | 10 | NA |
| 39 | 102.08 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 43 | 102.17 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 58 | 102.31 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 22 |
| 62 | 102.36 | radiation | 10 | 90 | < th | dose independent | rect. | 6 | 21 |
| 72 | 102.52 | temperature | 25 | 30 | < th | dose independent | rect. | 20 | 18 |
| 80 | 102.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 10 |
| 104 | 102.76 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 109 | 102.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 7 |
| 118 | 102.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 125 | 102.94 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 150 | 103.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 159 | 103.09 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 189 | 103.32 | humidity | 90 | 30 | > th | dose dependent | rect. | 21 | 13 |
| 213 | 103.40 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 215 | 103.41 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 223 | 103.43 | humidity | 90 | 30 | > th | dose dependent | sin | 9 | NA |
| 231 | 103.47 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 234 | 103.48 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 246 | 103.54 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 280 | 103.67 | humidity | 90 | 30 | > th | dose dependent | rect. | 9 | 22 |
| 285 | 103.70 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 290 | 103.71 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 306 | 103.71 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 323 | 103.72 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 324 | 103.72 | temperature | 20 | 10 | > th | dose dependent | sin | 8 | NA |
| 328 | 103.73 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 335 | 103.74 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 338 | 103.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 348 | 103.78 | radiation | 10 | 270 | > th | dose independent | rect. | 8 | 9 |
| 349 | 103.79 | temperature | 10 | 10 | > th | dose dependent | sin | 8 | NA |
| 355 | 103.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 358 | 103.81 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 360 | 103.82 | humidity | 80 | 270 | < th | dose independent | rect. | 8 | 9 |
| 366 | 103.83 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 13 |
| 376 | 103.85 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 427 | 103.95 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 441 | 103.97 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 14 |
| 450 | 103.99 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 454 | 103.99 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 465 | 104.03 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 485 | 104.07 | atmosphere | 995 | 43200 | < th | dose independent | sin | 9 | NA |
| 489 | 104.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 499 | 104.09 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 512 | 104.11 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 11 | NA |
| 515 | 104.12 | radiation | 1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 520 | 104.13 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 521 | 104.14 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 523 | 104.14 | temperature | 25 | 30 | < th | dose independent | rect. | 20 | 10 |
| 537 | 104.16 | temperature | 25 | 10 | < th | dose independent | rect. | 3 | 23 |
| 545 | 104.17 | atmosphere | 995 | 43200 | > th | dose independent | sin | 9 | NA |
| 557 | 104.19 | radiation | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 570 | 104.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 584 | 104.23 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 616 | 104.28 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 637 | 104.31 | humidity | 50 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 652 | 104.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 11 |
| 657 | 104.33 | radiation | 1 | 270 | > th | dose dependent | sin | 21 | NA |
| 663 | 104.34 | radiation | 10 | 270 | > th | dose independent | sin | 22 | NA |
| 676 | 104.35 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 693 | 104.38 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 764 | 104.46 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 770 | 104.47 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 22 |
| 773 | 104.47 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 774 | 104.47 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 805 | 104.51 | temperature | 25 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 820 | 104.53 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 826 | 104.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 833 | 104.54 | temperature | 30 | 30 | < th | dose dependent | sin | 8 | NA |
| 842 | 104.55 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 861 | 104.57 | temperature | 25 | 10 | > th | dose independent | sin | 7 | NA |
| 862 | 104.57 | wind | 3 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 877 | 104.58 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 889 | 104.59 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 899 | 104.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 916 | 104.62 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 918 | 104.62 | humidity | 90 | 30 | > th | dose independent | rect. | 21 | 10 |
| 928 | 104.63 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 14 |
| 932 | 104.63 | radiation | 1 | 270 | > th | dose dependent | rect. | 8 | 9 |
| 955 | 104.65 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 961 | 104.65 | radiation | 1 | 270 | > th | dose dependent | rect. | 8 | 22 |
| 964 | 104.66 | temperature | 25 | 10 | > th | dose independent | rect. | 17 | 23 |