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Os01g0881800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.96 (0.0446) R2 : 0.786
β1 : 4.04 (0.163) R2dD : 0.3 R2D : 0.245
β2 : 3.47 (0.116) R2dC : 0.45 R2C : 0.286
β3 : 2.15 (0.126) R2dE : 0.146 R2E : 0.0157
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.22 (0.095) R2dN8 : 0.103 R2N8 : 0.00883
σ : 0.832
deviance : 319.21
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C
peak time of C : 20.3
E
wheather : radiation
threshold : 12.04
memory length : 13
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 22.7
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
308.71 0.826 7.97 3.98 3.5 2.17 -1.85 -0.649 1.21 20.3 12.67 14 22.5 --
309.51 0.819 7.97 3.99 3.48 2.12 -1.76 -- 1.21 20.3 12.46 13 22.6 --
318.93 0.832 7.96 4.04 3.47 2.15 -- -0.385 1.21 20.3 12.1 13 22.6 --
319.21 0.832 7.96 4.04 3.47 2.15 -- -- 1.22 20.3 12.04 13 22.7 --
410.59 0.949 7.87 4.08 -- 2.86 -- -1.42 1.19 -- 16.79 2 7.94 --
377.37 0.911 7.97 4.01 3.19 -- -1.55 -- 1.15 22.1 -- -- -- --
386.86 0.921 7.96 4.07 3.2 -- -- -- 1.15 22.2 -- -- -- --
386.8 0.92 7.88 4.07 -- 3.19 -- -- 1.15 -- 841.8 2 7.86 --
746.12 1.27 8.06 -- 3.43 2.3 -- -- 0.796 20.3 10.03 23 22.6 --
1007.51 1.48 7.88 4.11 -- -- -- -- 1.15 -- -- -- -- --
823.29 1.34 8.07 -- 3.22 -- -- -- 0.696 22.3 -- -- -- --
823.47 1.34 7.98 -- -- 3.21 -- -- 0.697 -- 883.6 8 7.82 --
1453.98 1.78 7.98 -- -- -- -- -- 0.698 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 312.40 radiation 10 10 < th dose dependent sin 4 NA
2 312.83 radiation 20 10 < th dose dependent sin 6 NA
10 315.84 humidity 70 10 > th dose dependent rect. 22 22
11 316.03 humidity 70 10 > th dose dependent rect. 24 17
12 316.25 humidity 80 10 > th dose independent rect. 1 16
28 318.27 humidity 80 10 > th dose independent rect. 1 19
30 318.41 radiation 10 10 < th dose dependent rect. 2 15
62 320.83 humidity 70 10 > th dose dependent rect. 10 22
95 322.58 wind 1 14400 < th dose independent rect. 5 1
104 322.74 humidity 70 30 > th dose dependent rect. 11 18
107 322.79 wind 1 14400 < th dose dependent rect. 5 1
144 323.80 temperature 15 270 > th dose independent rect. 4 19
152 324.11 temperature 30 270 < th dose dependent rect. 4 9
163 324.57 radiation 1 30 > th dose independent sin 3 NA
164 324.59 radiation 1 30 < th dose independent sin 3 NA
202 325.57 humidity 60 43200 < th dose independent rect. 20 14
205 325.69 humidity 60 43200 > th dose independent rect. 21 13
208 325.75 wind 1 14400 < th dose dependent rect. 2 4
212 325.79 temperature 20 30 > th dose independent rect. 5 8
227 326.09 temperature 15 270 > th dose independent rect. 5 17
254 326.55 humidity 70 10 > th dose dependent no NA NA
271 326.76 humidity 60 43200 < th dose independent rect. 3 7
290 327.08 wind 1 14400 > th dose independent rect. 5 1
300 327.26 temperature 15 270 > th dose independent rect. 3 21
301 327.26 humidity 70 10 > th dose dependent rect. 15 23
309 327.41 humidity 50 43200 < th dose independent rect. 13 19
310 327.41 humidity 70 10 > th dose dependent rect. 17 23
326 327.62 humidity 70 10 > th dose dependent rect. 13 23
347 327.96 humidity 50 43200 < th dose independent sin 16 NA
350 328.06 humidity 60 43200 < th dose dependent rect. 23 11
359 328.11 temperature 25 270 < th dose independent rect. 4 7
373 328.27 radiation 1 270 < th dose dependent rect. 21 22
375 328.30 humidity 70 10 > th dose dependent rect. 11 9
376 328.32 wind 1 14400 < th dose independent rect. 1 5
381 328.38 atmosphere 1015 43200 > th dose dependent rect. 17 6
390 328.44 humidity 50 43200 > th dose independent rect. 13 19
391 328.44 atmosphere 1015 43200 > th dose dependent rect. 15 9
393 328.48 humidity 50 43200 < th dose independent rect. 13 9
403 328.50 humidity 70 10 > th dose dependent rect. 11 6
404 328.50 humidity 70 10 > th dose dependent rect. 19 23
409 328.54 atmosphere 1015 43200 < th dose independent rect. 19 1
417 328.60 atmosphere 1015 43200 > th dose dependent rect. 19 3
421 328.63 humidity 50 43200 > th dose independent rect. 14 23
434 328.74 humidity 50 43200 > th dose independent sin 17 NA
441 328.76 humidity 80 10 > th dose dependent rect. 6 23
487 329.11 atmosphere 1015 43200 > th dose independent rect. 16 5
488 329.11 wind 1 43200 < th dose dependent rect. 15 1
511 329.31 humidity 50 43200 > th dose independent rect. 13 9
542 329.45 radiation 1 270 < th dose dependent rect. 22 20
545 329.47 humidity 60 43200 < th dose independent rect. 9 1
581 329.65 humidity 50 43200 > th dose independent rect. 3 19
593 329.68 humidity 50 43200 > th dose independent no NA NA
608 329.73 radiation 1 30 < th dose independent rect. 2 15
617 329.74 humidity 50 43200 > th dose independent rect. 19 23
643 329.83 humidity 50 43200 < th dose independent no NA NA
644 329.83 humidity 50 43200 < th dose independent rect. 3 19
654 329.83 humidity 50 43200 > th dose independent rect. 6 23
664 329.85 atmosphere 1015 43200 > th dose dependent sin 17 NA
668 329.86 humidity 50 43200 < th dose independent rect. 9 23
710 329.94 humidity 50 43200 < th dose dependent rect. 13 20
715 329.95 humidity 50 43200 < th dose independent rect. 19 23
717 329.96 wind 1 43200 < th dose independent rect. 15 1
828 330.21 humidity 60 43200 < th dose dependent sin 8 NA
901 330.37 atmosphere 1015 43200 > th dose dependent rect. 11 8
961 330.48 humidity 50 43200 < th dose dependent rect. 14 3
970 330.50 humidity 70 10 > th dose dependent sin 4 NA
993 330.57 humidity 50 270 > th dose dependent rect. 10 18