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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0881100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Epsin, N-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.15 (0.027) R2 : 0.000756
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0334 (0.0568) R2dN8 : 0.000976 R2N8 : 0.000756
σ : 0.508
deviance : 118.47
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
95.4 0.459 3.11 0.25 0.0394 0.729 -0.37 2.98 0.0564 5.74 999.4 5923 -- --
99.29 0.464 3.12 0.141 0.0412 0.814 -0.372 -- 0.0958 5.66 1000 12491 -- --
95.61 0.455 3.11 0.248 0.053 0.745 -- 3.07 0.0543 8.77 999.3 5839 -- --
99.38 0.464 3.12 0.104 0.0653 0.806 -- -- 0.0812 7.86 1001 12507 -- --
95.78 0.456 3.11 0.25 -- 0.77 -- 3.14 0.058 -- 999.2 5828 -- --
115.99 0.505 3.14 0.284 0.0491 -- -0.319 -- -0.00425 6.03 -- -- -- --
116.12 0.505 3.14 0.283 0.0652 -- -- -- -0.00243 8.92 -- -- -- --
99.6 0.465 3.12 0.11 -- 0.816 -- -- 0.0834 -- 1001 12490 -- --
99.68 0.465 3.12 -- 0.0648 0.839 -- -- 0.0735 7.82 1001 12490 -- --
116.36 0.504 3.14 0.283 -- -- -- -- -0.00199 -- -- -- -- --
118.22 0.509 3.15 -- 0.0659 -- -- -- -0.0339 8.6 -- -- -- --
99.91 0.466 3.12 -- -- 0.84 -- -- 0.0747 -- 1001 12503 -- --
118.47 0.508 3.15 -- -- -- -- -- -0.0334 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.93 wind 7 4320 < th dose independent rect. 18 4
5 90.50 wind 7 4320 < th dose independent rect. 18 9
8 90.61 wind 7 4320 > th dose independent rect. 18 4
9 90.63 wind 5 4320 > th dose dependent rect. 18 4
10 90.64 wind 5 4320 > th dose independent rect. 21 1
19 91.30 wind 7 4320 > th dose independent rect. 18 9
31 91.60 wind 7 4320 > th dose dependent rect. 18 9
36 91.78 wind 5 4320 < th dose independent rect. 21 1
47 92.43 wind 9 4320 > th dose dependent rect. 20 2
155 94.18 humidity 80 30 < th dose independent rect. 20 11
163 94.52 humidity 90 1440 < th dose dependent rect. 3 1
171 94.73 temperature 20 720 < th dose independent rect. 18 1
198 95.45 wind 7 4320 < th dose independent rect. 8 1
208 95.75 humidity 80 90 < th dose independent rect. 1 5
213 95.96 humidity 80 270 < th dose dependent rect. 1 3
214 95.98 humidity 80 270 < th dose independent rect. 1 2
226 96.21 atmosphere 995 14400 < th dose independent rect. 16 1
229 96.22 atmosphere 995 14400 < th dose dependent rect. 16 1
231 96.24 atmosphere 995 14400 > th dose independent rect. 16 1
250 96.29 atmosphere 995 14400 > th dose independent rect. 16 3
251 96.30 wind 7 1440 > th dose independent rect. 8 1
257 96.31 humidity 80 270 < th dose independent rect. 23 6
317 96.42 atmosphere 995 14400 > th dose independent rect. 8 11
329 96.43 atmosphere 995 14400 < th dose independent rect. 22 18
336 96.44 atmosphere 995 14400 < th dose dependent rect. 14 1
349 96.45 atmosphere 995 14400 < th dose independent rect. 3 12
361 96.46 atmosphere 995 14400 > th dose independent rect. 1 14
363 96.46 atmosphere 995 14400 > th dose independent rect. 19 21
367 96.47 atmosphere 995 14400 > th dose independent rect. 22 18
371 96.47 humidity 80 270 < th dose dependent rect. 21 9
380 96.49 atmosphere 995 14400 < th dose dependent rect. 3 13
386 96.51 humidity 80 1440 < th dose independent rect. 22 1
406 96.53 humidity 80 270 < th dose dependent rect. 23 6
440 96.54 atmosphere 995 14400 < th dose dependent sin 2 NA
451 96.56 atmosphere 995 14400 > th dose independent sin 4 NA
468 96.58 atmosphere 995 14400 < th dose independent sin 4 NA
545 96.67 atmosphere 995 14400 < th dose dependent rect. 3 20
546 96.67 atmosphere 995 14400 < th dose dependent rect. 5 20
552 96.68 atmosphere 995 14400 < th dose dependent rect. 14 11
608 96.73 atmosphere 995 14400 < th dose dependent sin 18 NA
674 96.85 radiation 1 14400 < th dose dependent rect. 22 5
696 96.90 radiation 1 14400 < th dose dependent rect. 19 8
713 96.95 atmosphere 995 14400 > th dose independent rect. 8 23
720 96.96 atmosphere 995 14400 > th dose independent no NA NA
724 96.96 atmosphere 995 14400 > th dose independent rect. 9 21
725 96.96 atmosphere 995 14400 > th dose independent rect. 12 21
731 96.96 atmosphere 995 14400 > th dose independent rect. 4 23
737 96.96 atmosphere 995 14400 > th dose independent rect. 14 23
740 96.96 humidity 80 10 < th dose dependent rect. 2 5
747 96.97 atmosphere 995 14400 > th dose independent rect. 12 18
758 96.97 atmosphere 995 14400 > th dose independent rect. 1 23
832 97.01 atmosphere 995 14400 > th dose independent rect. 14 20
843 97.02 atmosphere 995 14400 < th dose independent no NA NA
844 97.02 humidity 80 10 < th dose independent rect. 24 7
849 97.02 atmosphere 995 14400 > th dose independent rect. 14 16
850 97.02 atmosphere 995 14400 < th dose independent rect. 14 16
919 97.03 atmosphere 995 14400 < th dose independent rect. 1 23
928 97.04 humidity 80 10 < th dose independent rect. 2 4