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Os01g0877600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0196) R2 : 0.42
β1 : -0.879 (0.072) R2dD : 0.197 R2D : 0.206
β2 : 0.584 (0.0498) R2dC : 0.175 R2C : 0.162
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.186 (0.042) R2dN8 : 0.0337 R2N8 : 0.0568
σ : 0.369
deviance : 62.25
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_____
C
peak time of C : 3.84
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.07 0.345 10.1 -0.968 0.41 0.372 -0.178 1.87 0.145 3.18 29.81 264 -- --
54.44 0.344 10 -0.798 0.395 0.582 -0.0917 -- 0.167 3.11 29.9 309 -- --
54.11 0.343 10 -0.964 0.397 0.378 -- 1.7 0.154 3.16 29.69 265 -- --
54.45 0.344 10 -0.797 0.399 0.584 -- -- 0.164 2.97 29.8 332 -- --
59.77 0.36 10 -0.971 -- 0.559 -- 1.48 0.184 -- 28.8 254 -- --
62.15 0.37 10 -0.876 0.583 -- 0.188 -- 0.187 3.86 -- -- -- --
62.25 0.369 10 -0.879 0.584 -- -- -- 0.186 3.84 -- -- -- --
60.56 0.362 10 -0.751 -- 0.673 -- -- 0.251 -- 28.9 275 -- --
70.52 0.391 10 -- 0.356 0.702 -- -- 0.225 3 29.84 396 -- --
81 0.421 10 -0.854 -- -- -- -- 0.202 -- -- -- -- --
82.6 0.425 10 -- 0.567 -- -- -- 0.284 3.86 -- -- -- --
75.19 0.404 9.99 -- -- 0.764 -- -- 0.34 -- 28.96 340 -- --
100.26 0.467 10 -- -- -- -- -- 0.297 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.99 wind 7.0 10 > th dose dependent rect. 12 1
3 52.71 humidity 70.0 270 > th dose independent rect. 15 12
5 52.85 temperature 30.0 720 < th dose independent rect. 7 5
6 52.86 temperature 30.0 270 < th dose independent rect. 13 22
7 52.90 temperature 30.0 270 < th dose independent rect. 7 12
8 52.90 temperature 30.0 270 < th dose independent rect. 7 21
13 53.15 temperature 30.0 720 < th dose independent rect. 9 3
16 53.22 wind 7.0 10 > th dose independent rect. 12 1
19 53.28 temperature 30.0 720 < th dose independent rect. 24 12
35 53.58 temperature 30.0 270 < th dose independent rect. 16 11
38 53.62 temperature 30.0 270 < th dose independent rect. 24 23
51 53.90 temperature 30.0 270 > th dose independent rect. 15 22
76 54.18 temperature 30.0 270 < th dose independent no NA NA
77 54.19 humidity 60.0 720 < th dose independent rect. 12 3
86 54.27 temperature 30.0 720 < th dose independent rect. 20 16
89 54.30 temperature 30.0 720 < th dose independent sin 3 NA
96 54.34 temperature 30.0 720 < th dose independent rect. 24 17
98 54.36 temperature 30.0 270 > th dose independent no NA NA
99 54.36 humidity 60.0 720 < th dose independent rect. 12 1
100 54.36 temperature 30.0 270 > th dose independent rect. 8 11
211 54.40 temperature 30.0 720 > th dose independent sin 5 NA
215 54.41 temperature 30.0 270 > th dose independent sin 19 NA
219 54.43 temperature 30.0 720 > th dose independent rect. 8 7
234 54.44 humidity 60.0 720 > th dose independent rect. 24 19
255 54.47 humidity 70.0 270 > th dose independent sin 14 NA
259 54.48 humidity 70.0 270 < th dose independent sin 15 NA
266 54.50 temperature 30.0 270 < th dose independent sin 19 NA
269 54.51 temperature 30.0 270 < th dose independent sin 11 NA
278 54.55 temperature 20.0 30 > th dose independent rect. 20 19
294 54.57 temperature 20.0 270 > th dose independent rect. 7 19
298 54.57 humidity 60.0 720 > th dose independent rect. 24 21
310 54.61 temperature 30.0 720 < th dose independent rect. 17 19
314 54.62 humidity 60.0 720 > th dose independent rect. 9 10
315 54.63 temperature 30.0 270 > th dose independent sin 11 NA
317 54.63 humidity 60.0 720 > th dose independent rect. 9 19
328 54.69 temperature 20.0 90 > th dose independent rect. 9 20
330 54.69 humidity 60.0 720 > th dose independent rect. 7 21
342 54.75 temperature 30.0 720 > th dose independent rect. 9 2
379 54.78 humidity 60.0 720 > th dose independent rect. 7 14
402 54.82 temperature 15.0 90 > th dose dependent rect. 20 9
429 54.87 humidity 60.0 720 > th dose independent rect. 7 12
446 54.88 temperature 25.0 720 > th dose dependent rect. 8 1
451 54.89 humidity 70.0 720 < th dose dependent rect. 12 1
452 54.89 temperature 15.0 10 > th dose dependent rect. 20 10
454 54.90 humidity 60.0 720 > th dose independent rect. 24 15
486 54.96 temperature 20.0 90 > th dose independent rect. 20 9
522 55.00 humidity 70.0 270 < th dose independent rect. 15 5
535 55.00 humidity 80.0 270 < th dose dependent rect. 12 8
560 55.03 precipitation 0.1 43200 > th dose dependent rect. 13 8
565 55.04 humidity 80.0 270 < th dose dependent rect. 12 15
570 55.05 temperature 20.0 14400 > th dose independent rect. 20 1
584 55.07 temperature 20.0 14400 < th dose independent rect. 20 2
587 55.07 radiation 20.0 4320 < th dose independent rect. 20 10
594 55.08 wind 9.0 43200 < th dose independent rect. 19 21
596 55.08 humidity 80.0 270 < th dose dependent sin 16 NA
599 55.09 wind 9.0 43200 > th dose independent rect. 20 20
601 55.09 radiation 30.0 720 > th dose dependent rect. 15 18
610 55.10 temperature 20.0 30 > th dose independent rect. 20 16
677 55.17 precipitation 0.1 43200 > th dose dependent rect. 13 5
691 55.19 humidity 70.0 720 < th dose dependent rect. 12 5
739 55.23 wind 9.0 43200 < th dose independent rect. 24 15
753 55.25 wind 9.0 43200 < th dose independent rect. 3 12
758 55.25 temperature 25.0 720 > th dose dependent rect. 8 3
827 55.30 wind 9.0 43200 < th dose independent rect. 9 23
830 55.30 wind 7.0 43200 > th dose dependent rect. 20 20
846 55.32 wind 9.0 43200 < th dose independent sin 3 NA
849 55.32 wind 9.0 43200 > th dose independent rect. 3 12
850 55.32 wind 9.0 43200 > th dose independent rect. 1 14
861 55.32 wind 9.0 43200 < th dose independent rect. 24 23
867 55.33 wind 9.0 43200 < th dose independent no NA NA
875 55.33 wind 9.0 43200 < th dose independent rect. 3 22
881 55.33 temperature 30.0 720 > th dose dependent sin 7 NA
882 55.33 precipitation 0.1 43200 > th dose dependent rect. 18 3
883 55.33 wind 3.0 43200 > th dose dependent rect. 18 14
905 55.34 wind 9.0 43200 < th dose independent rect. 3 20
914 55.34 wind 9.0 43200 < th dose independent rect. 6 23
944 55.35 wind 9.0 43200 > th dose independent rect. 9 23
949 55.35 wind 3.0 43200 > th dose dependent rect. 6 1