Os01g0875800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF266, plant family protein.
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Os01g0875800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF266, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.96 | 0.706 | 3.12 | -0.39 | 0.202 | 33.4 | 0.00444 | -167 | 0.0973 | 4.44 | 999.5 | 85 | 22.5 | 0.85 |
| 392.01 | 0.922 | 3.04 | -0.0982 | 0.311 | 12.5 | 6.94 | -- | 0.0909 | 6.26 | 996.4 | 129 | 20.5 | 3.37 |
| 225.96 | 0.7 | 3.12 | -0.39 | 0.202 | 33.4 | -- | -167 | 0.0973 | 4.45 | 999.5 | 86 | 22.5 | 0.848 |
| 226.23 | 0.701 | 3.02 | 0.184 | 0.2 | 6.15 | -- | -- | 0.0989 | 4.56 | 996.6 | 108 | 21.2 | 2.71 |
| 228.15 | 0.703 | 3.12 | -0.374 | -- | 33.2 | -- | -165 | 0.103 | -- | 999.5 | 86 | 22.1 | 0.907 |
| 263.74 | 0.761 | 3.02 | 0.217 | 0.22 | -- | 0.122 | -- | 0.0854 | 3.6 | -- | -- | -- | -- |
| 263.79 | 0.761 | 3.02 | 0.215 | 0.222 | -- | -- | -- | 0.0846 | 3.73 | -- | -- | -- | -- |
| 228.36 | 0.707 | 3.02 | 0.192 | -- | 6.19 | -- | -- | 0.104 | -- | 996.5 | 105 | 21.2 | 2.74 |
| 227.12 | 0.702 | 3.02 | -- | 0.204 | 6.18 | -- | -- | 0.0785 | 4.54 | 996.5 | 115 | 21.2 | 2.63 |
| 266.51 | 0.763 | 3.02 | 0.224 | -- | -- | -- | -- | 0.0905 | -- | -- | -- | -- | -- |
| 265.01 | 0.761 | 3.03 | -- | 0.226 | -- | -- | -- | 0.0607 | 3.72 | -- | -- | -- | -- |
| 229.34 | 0.708 | 3.02 | -- | -- | 6.21 | -- | -- | 0.083 | -- | 996.5 | 105 | 21.2 | 2.74 |
| 267.84 | 0.764 | 3.03 | -- | -- | -- | -- | -- | 0.0656 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.59 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 4 | 229.63 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 22 | 2 |
| 29 | 240.44 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 9 |
| 32 | 241.33 | wind | 5.0 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 42 | 241.83 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 46 | 242.29 | wind | 5.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 53 | 243.12 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 10 |
| 62 | 243.77 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 5 |
| 68 | 243.78 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 70 | 243.78 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 73 | 243.79 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 2 |
| 94 | 243.86 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 97 | 243.86 | wind | 5.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 113 | 244.37 | wind | 7.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 116 | 244.38 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 121 | 244.48 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 125 | 244.64 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 141 | 244.97 | wind | 5.0 | 90 | > th | dose dependent | rect. | 21 | 5 |
| 145 | 245.17 | wind | 5.0 | 90 | > th | dose dependent | rect. | 21 | 12 |
| 150 | 245.32 | wind | 5.0 | 90 | > th | dose dependent | rect. | 21 | 9 |
| 164 | 245.77 | wind | 3.0 | 10 | > th | dose independent | rect. | 24 | 3 |
| 245 | 248.08 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 5 |
| 246 | 248.09 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 24 | 8 |
| 247 | 248.13 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 20 | 13 |
| 249 | 248.15 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 12 |
| 251 | 248.16 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 261 | 248.17 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 279 | 248.32 | atmosphere | 1010.0 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 301 | 248.66 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 304 | 248.78 | atmosphere | 1010.0 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 308 | 248.80 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 309 | 248.81 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 310 | 248.81 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 311 | 248.82 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 327 | 248.84 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 333 | 248.86 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 12 |
| 349 | 248.93 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 369 | 249.05 | wind | 5.0 | 90 | > th | dose independent | rect. | 21 | 9 |
| 419 | 249.31 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 480 | 249.51 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 488 | 249.54 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 20 | 13 |
| 491 | 249.55 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 498 | 249.56 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 499 | 249.56 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 549 | 249.70 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 20 | 1 |
| 584 | 249.82 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 621 | 249.93 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 622 | 249.93 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 629 | 249.95 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 640 | 249.98 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 712 | 250.14 | wind | 5.0 | 270 | > th | dose dependent | rect. | 21 | 1 |
| 762 | 250.23 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 773 | 250.26 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 778 | 250.27 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 787 | 250.29 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 791 | 250.29 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 799 | 250.30 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 813 | 250.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 814 | 250.32 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 842 | 250.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 5 |
| 845 | 250.36 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 875 | 250.40 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 902 | 250.43 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 916 | 250.45 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 937 | 250.48 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 939 | 250.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 950 | 250.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 960 | 250.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 993 | 250.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 8 |