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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0872300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.84 (0.0248) R2 : 0.0172
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.148 (0.0523) R2dN8 : 0.0222 R2N8 : 0.0172
σ : 0.467
deviance : 100.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.08 0.457 -571 3510 0.112 -168000 -0.386 1030000 0.146 19.6 995 10 -- --
95.46 0.459 2.85 -0.103 0.112 1.77 -0.384 -- 0.146 19.6 995 10 -- --
96.48 0.457 -571 3510 0.111 -168000 -- 1030000 0.146 20.1 995 10 -- --
95.35 0.458 2.85 -0.0924 0.116 1.98 -- -- 0.144 20.1 994.7 19 -- --
97.16 0.459 -571 3510 -- -168000 -- 1030000 0.146 -- 995 10 -- --
98.91 0.466 2.85 -0.089 0.128 -- -0.336 -- 0.141 19.5 -- -- -- --
99.22 0.466 2.85 -0.0813 0.128 -- -- -- 0.14 19.6 -- -- -- --
96.08 0.459 2.84 -0.0936 -- 2.01 -- -- 0.143 -- 994.7 19 -- --
95.58 0.458 2.85 -- 0.116 1.96 -- -- 0.155 20 994.7 19 -- --
100.1 0.468 2.85 -0.0831 -- -- -- -- 0.138 -- -- -- -- --
99.4 0.466 2.85 -- 0.128 -- -- -- 0.149 19.6 -- -- -- --
96.31 0.459 2.84 -- -- 1.99 -- -- 0.153 -- 994.7 19 -- --
100.28 0.467 2.84 -- -- -- -- -- 0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.84 atmosphere 1005.0 30 > th dose dependent rect. 16 1
2 93.88 wind 5.0 30 > th dose dependent rect. 16 1
3 93.91 atmosphere 1005.0 30 > th dose independent rect. 16 1
4 93.95 humidity 60.0 30 > th dose independent rect. 16 1
5 94.05 temperature 30.0 30 < th dose independent rect. 16 1
6 94.21 wind 5.0 30 > th dose independent rect. 16 1
8 94.28 humidity 50.0 30 > th dose dependent rect. 16 1
17 94.63 radiation 20.0 30 < th dose dependent rect. 16 1
19 94.68 radiation 20.0 30 < th dose independent rect. 16 1
21 94.71 humidity 80.0 30 < th dose independent rect. 16 1
22 94.71 atmosphere 995.0 30 > th dose independent rect. 16 1
24 94.73 radiation 1.0 30 > th dose independent rect. 16 1
25 94.74 temperature 25.0 30 > th dose independent rect. 16 1
30 94.80 temperature 10.0 1440 > th dose independent rect. 17 1
36 94.80 radiation 30.0 1440 < th dose independent rect. 17 1
42 94.80 temperature 10.0 1440 > th dose independent rect. 18 23
49 94.84 wind 9.0 30 < th dose independent rect. 16 1
50 94.84 temperature 10.0 30 > th dose independent rect. 16 1
53 94.84 atmosphere 1010.0 30 < th dose independent rect. 16 1
56 94.84 precipitation 0.1 30 < th dose independent rect. 16 1
57 94.84 temperature 10.0 30 > th dose independent rect. 17 23
58 94.84 precipitation 0.1 30 < th dose dependent rect. 16 1
74 94.95 atmosphere 995.0 10 > th dose independent sin 6 NA
76 94.98 radiation 10.0 90 > th dose dependent rect. 16 1
91 95.01 temperature 10.0 30 > th dose dependent rect. 16 1
129 95.17 atmosphere 1000.0 90 < th dose dependent rect. 14 1
131 95.20 atmosphere 1000.0 10 < th dose dependent rect. 16 1
133 95.21 wind 9.0 30 < th dose dependent rect. 16 1
145 95.27 atmosphere 1015.0 30 < th dose dependent rect. 16 1
148 95.29 humidity 90.0 30 < th dose dependent rect. 16 1
151 95.31 temperature 30.0 30 > th dose dependent rect. 16 1
159 95.37 atmosphere 995.0 1440 > th dose independent rect. 17 1
160 95.37 temperature 30.0 30 < th dose dependent rect. 16 1
161 95.37 wind 1.0 1440 < th dose dependent rect. 20 2
162 95.37 temperature 30.0 10 > th dose dependent rect. 15 4
197 95.45 atmosphere 1000.0 90 < th dose independent rect. 23 2
198 95.46 wind 1.0 1440 < th dose independent rect. 21 1
199 95.47 atmosphere 1000.0 10 < th dose independent rect. 23 3
230 95.49 atmosphere 995.0 720 > th dose independent rect. 11 18
240 95.52 radiation 1.0 90 < th dose independent rect. 8 3
244 95.52 radiation 1.0 90 < th dose dependent rect. 8 3
254 95.58 temperature 30.0 720 < th dose independent rect. 5 6
307 95.64 atmosphere 995.0 10 < th dose independent sin 6 NA
308 95.64 atmosphere 995.0 90 < th dose independent rect. 14 1
309 95.64 atmosphere 995.0 10 < th dose independent rect. 15 1
436 95.64 precipitation 0.1 30 < th dose independent rect. 17 23
437 95.64 atmosphere 995.0 10 < th dose dependent sin 6 NA
570 95.64 precipitation 0.1 30 < th dose dependent rect. 17 23
572 95.65 atmosphere 1000.0 30 > th dose independent rect. 17 23
606 95.72 atmosphere 995.0 90 > th dose independent rect. 11 12
614 95.75 atmosphere 1000.0 720 > th dose independent rect. 19 10
616 95.75 wind 1.0 270 < th dose dependent rect. 18 4
630 95.80 wind 1.0 720 > th dose independent rect. 17 6
634 95.83 wind 1.0 270 < th dose dependent rect. 20 2
635 95.84 wind 9.0 720 < th dose independent rect. 5 6
636 95.84 humidity 50.0 720 > th dose independent rect. 5 6
637 95.84 precipitation 0.1 720 < th dose independent rect. 17 6
640 95.84 precipitation 0.1 720 < th dose dependent rect. 17 6
645 95.87 atmosphere 995.0 720 > th dose independent rect. 17 6
646 95.87 precipitation 0.1 720 < th dose independent rect. 5 6
647 95.87 precipitation 0.1 720 < th dose dependent rect. 5 6
648 95.88 temperature 30.0 10 > th dose dependent sin 12 NA
649 95.89 wind 1.0 1440 > th dose independent rect. 20 2
653 95.91 temperature 10.0 720 > th dose independent rect. 5 6
654 95.91 atmosphere 995.0 720 > th dose independent rect. 5 6
655 95.91 atmosphere 1015.0 720 < th dose independent rect. 5 6
656 95.91 temperature 10.0 720 > th dose independent rect. 11 18
657 95.94 temperature 10.0 720 > th dose independent rect. 17 6
658 95.94 radiation 30.0 720 < th dose independent rect. 17 6
660 95.94 temperature 10.0 720 > th dose independent rect. 23 18
663 95.95 atmosphere 995.0 720 > th dose independent rect. 23 18
667 95.98 wind 1.0 270 < th dose independent rect. 20 2
668 95.98 precipitation 0.1 720 < th dose independent rect. 11 18
669 95.98 precipitation 0.1 720 < th dose dependent rect. 11 18
676 96.01 humidity 50.0 30 > th dose independent rect. 14 13
678 96.02 atmosphere 995.0 30 > th dose independent rect. 15 23
684 96.04 wind 9.0 720 < th dose independent rect. 23 18
686 96.04 wind 5.0 10 > th dose dependent rect. 1 10
688 96.05 atmosphere 995.0 1440 > th dose independent rect. 17 11
689 96.05 atmosphere 995.0 90 > th dose independent rect. 10 23
690 96.05 atmosphere 995.0 30 > th dose independent rect. 21 23
691 96.05 wind 5.0 10 > th dose dependent rect. 3 8
694 96.06 wind 5.0 10 > th dose dependent rect. 7 4
698 96.07 precipitation 0.1 720 < th dose independent rect. 23 18
700 96.07 precipitation 0.1 720 < th dose dependent rect. 23 18
725 96.16 wind 9.0 30 < th dose independent rect. 17 23
727 96.16 radiation 40.0 720 < th dose dependent rect. 17 6
730 96.17 atmosphere 1000.0 10 < th dose independent rect. 23 1
750 96.17 atmosphere 1000.0 720 > th dose independent rect. 19 18
799 96.22 atmosphere 995.0 720 > th dose independent rect. 7 10
809 96.25 atmosphere 1000.0 720 > th dose independent rect. 3 10
810 96.25 atmosphere 995.0 720 > th dose independent rect. 5 14
830 96.26 temperature 25.0 10 > th dose independent rect. 19 12
831 96.26 humidity 50.0 720 > th dose independent rect. 23 18
841 96.28 wind 9.0 30 < th dose independent rect. 14 13
879 96.31 wind 9.0 10 > th dose independent rect. 19 16
883 96.31 wind 9.0 10 > th dose dependent rect. 19 16
890 96.33 radiation 40.0 30 < th dose independent rect. 14 13
891 96.34 temperature 30.0 30 < th dose independent rect. 16 11
892 96.34 wind 9.0 30 > th dose independent rect. 21 14
895 96.34 wind 9.0 30 > th dose dependent rect. 21 14
901 96.35 temperature 30.0 720 < th dose independent rect. 21 14
902 96.35 atmosphere 1000.0 720 > th dose independent rect. 17 14
904 96.35 atmosphere 995.0 720 > th dose independent rect. 1 22
909 96.36 precipitation 0.1 30 < th dose independent rect. 14 13
910 96.36 atmosphere 995.0 10 > th dose independent rect. 11 22
912 96.36 precipitation 0.1 30 < th dose dependent rect. 14 13
915 96.37 wind 5.0 30 < th dose independent rect. 3 11
923 96.38 atmosphere 995.0 30 > th dose independent rect. 3 13
930 96.39 humidity 50.0 720 > th dose independent rect. 15 2
931 96.39 wind 9.0 30 > th dose independent rect. 1 10
937 96.39 wind 9.0 30 > th dose dependent rect. 1 10
944 96.40 temperature 25.0 10 > th dose independent rect. 19 14
947 96.40 radiation 1.0 720 < th dose dependent rect. 19 10
953 96.41 wind 5.0 10 > th dose independent rect. 10 1
957 96.41 humidity 60.0 10 < th dose independent rect. 10 1
959 96.41 temperature 30.0 720 < th dose independent rect. 23 11
965 96.41 humidity 60.0 10 < th dose dependent rect. 10 1
969 96.42 humidity 50.0 30 > th dose independent rect. 3 11
972 96.42 radiation 40.0 30 < th dose independent rect. 9 18
979 96.43 temperature 10.0 30 > th dose independent rect. 3 11
981 96.43 atmosphere 995.0 30 > th dose independent rect. 3 11
982 96.43 atmosphere 1015.0 30 < th dose independent rect. 3 11
984 96.43 temperature 10.0 30 > th dose independent rect. 14 13
986 96.43 atmosphere 995.0 720 > th dose independent rect. 2 20
999 96.44 wind 9.0 720 < th dose independent rect. 17 6