Os01g0871400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0871400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.34 | 0.447 | 2.68 | 0.0651 | 0.0815 | 1.24 | -0.163 | 2.3 | 0.0435 | 4.39 | 1016 | 4194 | -- | -- |
| 91.57 | 0.446 | 2.65 | 0.105 | 0.0699 | 0.262 | -0.0704 | -- | 0.0577 | 4.93 | 1014 | 4983 | -- | -- |
| 90.36 | 0.443 | 2.68 | 0.0569 | 0.0737 | 1.3 | -- | 2.48 | 0.0392 | 4.89 | 1016 | 4183 | -- | -- |
| 91.56 | 0.446 | 2.65 | 0.117 | 0.0801 | 0.268 | -- | -- | 0.0621 | 5.17 | 1014 | 4793 | -- | -- |
| 90.69 | 0.444 | 2.69 | 0.115 | -- | 1.8 | -- | 3.5 | 0.0513 | -- | 1017 | 4187 | -- | -- |
| 93.17 | 0.453 | 2.66 | 0.0738 | 0.0715 | -- | -0.141 | -- | 0.0229 | 4.49 | -- | -- | -- | -- |
| 93.19 | 0.452 | 2.66 | 0.0751 | 0.0752 | -- | -- | -- | 0.0237 | 5.57 | -- | -- | -- | -- |
| 91.91 | 0.446 | 2.66 | 0.122 | -- | 0.259 | -- | -- | 0.0626 | -- | 1014 | 4828 | -- | -- |
| 91.9 | 0.446 | 2.66 | -- | 0.0848 | 0.262 | -- | -- | 0.0439 | 5.24 | 1014 | 4502 | -- | -- |
| 93.49 | 0.452 | 2.66 | 0.0776 | -- | -- | -- | -- | 0.0255 | -- | -- | -- | -- | -- |
| 93.34 | 0.452 | 2.67 | -- | 0.0764 | -- | -- | -- | 0.0153 | 5.53 | -- | -- | -- | -- |
| 92.27 | 0.447 | 2.66 | -- | -- | 0.247 | -- | -- | 0.0459 | -- | 1014 | 4644 | -- | -- |
| 93.65 | 0.452 | 2.67 | -- | -- | -- | -- | -- | 0.0169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.13 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 3 | 85.73 | wind | 7.0 | 720 | > th | dose independent | rect. | 24 | 9 |
| 6 | 86.54 | wind | 7.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 10 | 86.93 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 4 |
| 14 | 87.20 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 16 | 87.24 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 19 | 87.28 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 16 | 3 |
| 29 | 87.59 | wind | 5.0 | 90 | > th | dose independent | rect. | 13 | 1 |
| 32 | 87.66 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 34 | 87.72 | wind | 5.0 | 90 | > th | dose dependent | rect. | 12 | 2 |
| 35 | 87.74 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 2 |
| 50 | 87.99 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 51 | 88.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 52 | 88.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 55 | 88.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 56 | 88.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 63 | 88.13 | wind | 5.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 75 | 88.26 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 82 | 88.30 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 11 |
| 83 | 88.30 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 88 | 88.33 | wind | 5.0 | 720 | > th | dose independent | rect. | 24 | 1 |
| 89 | 88.33 | wind | 5.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 92 | 88.33 | wind | 5.0 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 136 | 88.37 | temperature | 25.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 138 | 88.37 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 139 | 88.38 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 24 | 1 |
| 141 | 88.38 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 24 | 1 |
| 176 | 88.49 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 208 | 88.56 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 235 | 88.63 | wind | 5.0 | 90 | > th | dose dependent | rect. | 18 | 8 |
| 294 | 88.72 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 9 |
| 307 | 88.73 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 313 | 88.74 | temperature | 25.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 343 | 88.77 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 360 | 88.79 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 9 |
| 365 | 88.80 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 5 |
| 375 | 88.80 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 376 | 88.80 | wind | 7.0 | 90 | > th | dose dependent | rect. | 23 | 5 |
| 382 | 88.81 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 401 | 88.82 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 404 | 88.83 | wind | 5.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 410 | 88.83 | temperature | 25.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 412 | 88.83 | wind | 5.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 422 | 88.84 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 1 |
| 426 | 88.84 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 22 | 1 |
| 442 | 88.86 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 11 |
| 467 | 88.89 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 472 | 88.90 | wind | 3.0 | 10 | > th | dose dependent | rect. | 1 | 2 |
| 486 | 88.92 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 562 | 89.01 | wind | 7.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 569 | 89.01 | wind | 3.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 604 | 89.05 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 628 | 89.10 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 630 | 89.10 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 633 | 89.10 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 635 | 89.11 | wind | 5.0 | 720 | > th | dose independent | sin | 8 | NA |
| 666 | 89.15 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 669 | 89.15 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 673 | 89.15 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 740 | 89.22 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 754 | 89.22 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 867 | 89.32 | temperature | 25.0 | 720 | < th | dose independent | sin | 12 | NA |
| 868 | 89.32 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 949 | 89.38 | wind | 5.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 977 | 89.41 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 1 |