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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0868900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteinase inhibitor I9, subtilisin propeptide domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.33 (0.046) R2 : 0.00512
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.148 (0.0968) R2dN8 : 0.00661 R2N8 : 0.00512
σ : 0.866
deviance : 344.1
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
314.51 0.833 3.22 0.437 0.158 0.887 -0.62 -1.56 0.257 14 24.63 1476 -- --
319.23 0.832 3.27 0.109 0.0183 0.769 -0.869 -- 0.0905 15.9 24.5 1408 -- --
315.77 0.828 3.21 0.468 0.156 0.902 -- -1.7 0.268 12.5 24.7 1455 -- --
319.11 0.832 3.27 -0.0704 0.168 0.793 -- -- 0.113 13 24.57 1501 -- --
317.13 0.829 3.21 0.456 -- 0.91 -- -1.67 0.272 -- 24.68 1413 -- --
336.69 0.86 3.34 -0.321 0.202 -- -0.693 -- -0.178 14.2 -- -- -- --
338.36 0.861 3.34 -0.341 0.202 -- -- -- -0.183 13.3 -- -- -- --
320.47 0.834 3.28 -0.0708 -- 0.801 -- -- 0.1 -- 24.66 1420 -- --
319.12 0.832 3.27 -- 0.164 0.797 -- -- 0.112 12.5 24.53 1464 -- --
340.88 0.863 3.34 -0.349 -- -- -- -- -0.187 -- -- -- -- --
341.43 0.864 3.33 -- 0.208 -- -- -- -0.145 13.4 -- -- -- --
320.59 0.834 3.27 -- -- 0.82 -- -- 0.113 -- 24.6 1420 -- --
344.1 0.866 3.33 -- -- -- -- -- -0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 312.65 humidity 90 43200 > th dose dependent rect. 23 1
13 314.01 radiation 1 43200 < th dose independent rect. 10 1
14 314.01 radiation 1 43200 < th dose dependent rect. 10 1
15 314.03 radiation 20 43200 > th dose independent rect. 6 1
28 314.07 radiation 20 43200 > th dose dependent rect. 16 16
32 314.14 radiation 1 43200 > th dose independent rect. 10 1
37 314.20 humidity 90 43200 > th dose dependent rect. 20 11
38 314.21 radiation 40 43200 < th dose independent rect. 14 18
39 314.21 humidity 90 43200 > th dose dependent rect. 18 12
43 314.25 humidity 60 43200 > th dose independent rect. 19 1
44 314.25 radiation 40 43200 < th dose independent rect. 14 7
49 314.26 radiation 40 43200 < th dose independent rect. 14 5
53 314.27 radiation 30 43200 < th dose independent rect. 7 1
54 314.27 radiation 40 43200 < th dose independent rect. 14 3
64 314.28 radiation 30 43200 < th dose independent rect. 17 15
65 314.29 radiation 30 43200 < th dose independent rect. 4 4
67 314.29 radiation 30 43200 < th dose independent rect. 24 8
86 314.36 humidity 90 43200 > th dose independent rect. 23 1
89 314.39 humidity 60 43200 < th dose independent rect. 19 1
93 314.40 radiation 20 43200 > th dose dependent rect. 6 2
109 314.42 humidity 90 43200 > th dose dependent sin 12 NA
115 314.45 temperature 25 4320 > th dose independent rect. 10 1
124 314.51 radiation 1 43200 < th dose dependent rect. 8 4
131 314.55 radiation 1 43200 < th dose dependent rect. 8 1
134 314.57 radiation 1 43200 < th dose independent rect. 8 1
139 314.60 radiation 1 43200 > th dose independent rect. 8 1
142 314.62 radiation 1 43200 > th dose dependent rect. 5 1
153 314.68 temperature 25 1440 > th dose independent rect. 3 12
154 314.68 temperature 25 1440 > th dose independent rect. 2 20
159 314.70 wind 1 43200 < th dose dependent rect. 19 9
170 314.73 radiation 10 43200 < th dose independent rect. 5 2
179 314.75 radiation 20 43200 < th dose independent rect. 15 2
184 314.75 radiation 10 43200 < th dose independent rect. 20 11
186 314.75 temperature 25 1440 < th dose independent rect. 1 21
198 314.79 radiation 40 43200 < th dose independent sin 13 NA
199 314.79 temperature 25 14400 < th dose independent rect. 8 1
211 314.80 radiation 20 43200 < th dose independent rect. 15 6
217 314.81 temperature 25 1440 > th dose independent sin 2 NA
247 314.85 radiation 10 43200 < th dose dependent rect. 5 1
250 314.86 temperature 25 1440 < th dose independent rect. 2 13
258 314.88 radiation 10 43200 < th dose independent sin 12 NA
260 314.88 temperature 25 1440 < th dose independent rect. 3 11
267 314.90 wind 9 43200 > th dose independent rect. 10 11
271 314.91 radiation 1 43200 < th dose independent rect. 8 4
278 314.92 radiation 1 43200 > th dose independent rect. 8 4
279 314.92 humidity 90 43200 > th dose dependent rect. 4 1
298 314.96 temperature 25 14400 > th dose dependent rect. 11 1
303 314.97 temperature 25 1440 < th dose independent rect. 18 22
312 314.99 temperature 25 1440 < th dose independent sin 3 NA
319 314.99 temperature 25 14400 > th dose dependent rect. 17 1
323 315.00 humidity 60 43200 < th dose independent rect. 11 1
327 315.00 temperature 25 1440 > th dose independent rect. 18 23
329 315.01 wind 9 43200 < th dose independent rect. 10 11
392 315.05 humidity 90 43200 > th dose dependent rect. 3 4
404 315.07 wind 7 43200 > th dose independent rect. 5 2
408 315.07 wind 9 43200 > th dose independent rect. 13 12
424 315.08 wind 7 43200 > th dose dependent rect. 11 1
426 315.08 radiation 40 43200 > th dose dependent rect. 14 20
431 315.09 temperature 25 1440 > th dose independent rect. 7 7
464 315.11 temperature 25 14400 > th dose independent rect. 18 2
474 315.11 temperature 25 1440 < th dose independent rect. 7 22
481 315.12 wind 9 43200 > th dose independent rect. 10 5
485 315.12 temperature 25 1440 > th dose independent rect. 7 15
501 315.14 temperature 25 14400 < th dose independent rect. 18 2
520 315.15 temperature 25 1440 > th dose independent rect. 7 22
536 315.16 radiation 1 43200 > th dose dependent rect. 18 13
581 315.20 radiation 20 43200 < th dose dependent rect. 19 11
598 315.22 temperature 25 1440 < th dose independent rect. 7 7
673 315.26 temperature 25 1440 > th dose independent rect. 7 18
679 315.26 temperature 25 1440 < th dose independent rect. 21 23
687 315.27 temperature 25 1440 < th dose independent rect. 7 16
690 315.27 temperature 25 1440 > th dose independent rect. 21 23
740 315.29 temperature 25 4320 > th dose independent rect. 4 7
758 315.30 temperature 25 1440 < th dose independent no NA NA
791 315.32 wind 9 43200 < th dose independent rect. 10 5
805 315.33 temperature 25 1440 > th dose independent no NA NA
883 315.37 wind 9 43200 > th dose dependent rect. 13 12
888 315.38 temperature 25 4320 < th dose independent rect. 4 7
940 315.43 wind 9 43200 > th dose independent rect. 11 16
956 315.44 temperature 20 14400 > th dose dependent rect. 3 1
961 315.45 wind 9 43200 < th dose independent rect. 13 12
980 315.46 radiation 30 43200 > th dose dependent sin 12 NA