Os01g0867200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os01g0867200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.11 | 0.361 | 9.9 | 0.355 | 1.23 | -1.2 | -0.129 | 0.912 | 0.076 | 19.7 | 29.73 | 208 | -- | -- |
| 60.04 | 0.361 | 9.89 | 0.505 | 1.22 | -1.2 | -0.184 | -- | 0.111 | 19.6 | 29.37 | 216 | -- | -- |
| 59.16 | 0.358 | 9.9 | 0.354 | 1.23 | -1.2 | -- | 0.932 | 0.0746 | 19.7 | 29.69 | 205 | -- | -- |
| 60.15 | 0.361 | 9.89 | 0.514 | 1.22 | -1.21 | -- | -- | 0.112 | 19.7 | 29.34 | 209 | -- | -- |
| 117.92 | 0.506 | 9.89 | 0.182 | -- | -2.08 | -- | 0.814 | -0.0192 | -- | 31.92 | 433 | -- | -- |
| 79.67 | 0.418 | 9.83 | 0.817 | 1.47 | -- | -0.272 | -- | 0.361 | 18.8 | -- | -- | -- | -- |
| 79.86 | 0.418 | 9.83 | 0.821 | 1.46 | -- | -- | -- | 0.36 | 18.9 | -- | -- | -- | -- |
| 118.53 | 0.507 | 9.88 | 0.294 | -- | -2.13 | -- | -- | -0.0299 | -- | 31.41 | 430 | -- | -- |
| 66.31 | 0.379 | 9.91 | -- | 1.18 | -1.43 | -- | -- | 0.0136 | 19.9 | 29.2 | 217 | -- | -- |
| 192.25 | 0.648 | 9.8 | 0.789 | -- | -- | -- | -- | 0.332 | -- | -- | -- | -- | -- |
| 97.63 | 0.462 | 9.85 | -- | 1.46 | -- | -- | -- | 0.269 | 18.9 | -- | -- | -- | -- |
| 120.75 | 0.512 | 9.9 | -- | -- | -2.21 | -- | -- | -0.0593 | -- | 31.23 | 447 | -- | -- |
| 208.69 | 0.674 | 9.82 | -- | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.95 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 93 | 54.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 103 | 55.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 111 | 55.55 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 20 |
| 118 | 55.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 196 | 57.32 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 18 |
| 212 | 57.64 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 12 |
| 234 | 57.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 252 | 58.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 12 |
| 257 | 58.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 271 | 58.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 287 | 58.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 291 | 58.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 298 | 58.76 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 308 | 58.83 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 318 | 58.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 319 | 58.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 320 | 58.91 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 340 | 59.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 374 | 59.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 524 | 59.75 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 526 | 59.78 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 529 | 59.79 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 532 | 59.79 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 582 | 59.96 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 721 | 60.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 741 | 60.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 761 | 60.53 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 772 | 60.57 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 815 | 60.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 818 | 60.70 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 843 | 60.76 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 22 |
| 930 | 60.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 937 | 60.96 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 955 | 60.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 971 | 61.02 | temperature | 30 | 90 | < th | dose dependent | sin | 21 | NA |
| 972 | 61.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 7 |