Os01g0864200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0864200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.5 | 0.76 | 8.42 | 1.69 | 0.622 | 1.59 | -0.0639 | -1.46 | -0.00914 | 10.7 | 12.06 | 11328 | -- | -- |
| 265.47 | 0.759 | 8.38 | 1.59 | 0.596 | 1.76 | -0.0464 | -- | -0.00403 | 10.6 | 12.05 | 23066 | -- | -- |
| 261.51 | 0.753 | 8.42 | 1.69 | 0.62 | 1.59 | -- | -1.46 | -0.00985 | 10.7 | 12 | 11344 | -- | -- |
| 265.42 | 0.759 | 8.37 | 1.59 | 0.623 | 1.77 | -- | -- | 0.00748 | 10.7 | 11.53 | 23063 | -- | -- |
| 284.25 | 0.785 | 8.44 | 1.69 | -- | 1.57 | -- | -1.4 | -0.0132 | -- | 12.3 | 11661 | -- | -- |
| 313.66 | 0.83 | 8.23 | 3.1 | 0.591 | -- | -0.155 | -- | 0.649 | 10.4 | -- | -- | -- | -- |
| 313.75 | 0.829 | 8.23 | 3.09 | 0.591 | -- | -- | -- | 0.649 | 10.4 | -- | -- | -- | -- |
| 287.56 | 0.79 | 8.38 | 1.91 | -- | 1.71 | -- | -- | 0.00817 | -- | 12.3 | 13101 | -- | -- |
| 283.97 | 0.785 | 8.49 | -- | 0.637 | 2.7 | -- | -- | -0.502 | 10.6 | 6.77 | 47520 | -- | -- |
| 335.13 | 0.855 | 8.25 | 3.08 | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
| 565.45 | 1.11 | 8.31 | -- | 0.576 | -- | -- | -- | 0.304 | 10 | -- | -- | -- | -- |
| 307.07 | 0.816 | 8.51 | -- | -- | 2.72 | -- | -- | -0.509 | -- | 7.721 | 44760 | -- | -- |
| 585.46 | 1.13 | 8.32 | -- | -- | -- | -- | -- | 0.305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 251.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 12 | 252.90 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 18 | 253.53 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 36 | 254.86 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 54 | 256.11 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 16 |
| 83 | 257.20 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 87 | 257.42 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 103 | 257.86 | humidity | 90 | 14400 | > th | dose independent | sin | 3 | NA |
| 107 | 257.92 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 132 | 258.58 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 142 | 258.78 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 161 | 259.21 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 177 | 259.40 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 190 | 259.68 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 204 | 259.90 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 206 | 259.92 | wind | 9 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 220 | 260.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 229 | 260.34 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 237 | 260.45 | humidity | 90 | 14400 | < th | dose independent | sin | 4 | NA |
| 239 | 260.51 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 244 | 260.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 246 | 260.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 257 | 260.72 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 267 | 260.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 274 | 260.91 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 285 | 260.98 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 290 | 261.03 | temperature | 10 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 317 | 261.19 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 22 |
| 318 | 261.20 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 322 | 261.23 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 334 | 261.30 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 336 | 261.30 | temperature | 10 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 401 | 261.65 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 403 | 261.66 | wind | 3 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 408 | 261.67 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 418 | 261.72 | temperature | 30 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 437 | 261.77 | temperature | 30 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 454 | 261.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 476 | 261.88 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 546 | 262.11 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 551 | 262.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 556 | 262.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 557 | 262.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 575 | 262.17 | wind | 3 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 608 | 262.25 | temperature | 10 | 14400 | > th | dose dependent | sin | 23 | NA |
| 610 | 262.25 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 624 | 262.28 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 632 | 262.31 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 18 |
| 664 | 262.41 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 688 | 262.46 | temperature | 30 | 14400 | < th | dose dependent | sin | 23 | NA |
| 692 | 262.46 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 707 | 262.49 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 712 | 262.52 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 721 | 262.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 738 | 262.58 | radiation | 1 | 14400 | > th | dose independent | sin | 6 | NA |
| 746 | 262.59 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 770 | 262.61 | humidity | 90 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 787 | 262.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 792 | 262.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 818 | 262.66 | radiation | 1 | 14400 | < th | dose independent | sin | 6 | NA |
| 851 | 262.69 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 930 | 262.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 933 | 262.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 941 | 262.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 969 | 262.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 998 | 262.84 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 4 |