Os01g0863500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0863500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.27 | 0.615 | 2.82 | 0.316 | 0.0346 | -1.97 | 0.198 | -1.11 | 0.149 | 15 | 1015 | 1234 | -- | -- |
| 171.85 | 0.611 | 2.82 | 0.339 | 0.035 | -1.65 | 0.252 | -- | 0.15 | 14.9 | 1015 | 1234 | -- | -- |
| 171.39 | 0.61 | 2.82 | 0.318 | 0.0381 | -1.97 | -- | -1.17 | 0.151 | 16.1 | 1015 | 1234 | -- | -- |
| 172.05 | 0.611 | 2.82 | 0.343 | 0.0411 | -1.64 | -- | -- | 0.151 | 16.4 | 1015 | 1234 | -- | -- |
| 171.47 | 0.61 | 2.82 | 0.317 | -- | -1.98 | -- | -1.18 | 0.149 | -- | 1015 | 1234 | -- | -- |
| 182.5 | 0.633 | 2.83 | 0.285 | 0.0667 | -- | 0.143 | -- | 0.117 | 15.4 | -- | -- | -- | -- |
| 182.56 | 0.633 | 2.83 | 0.288 | 0.0672 | -- | -- | -- | 0.118 | 14.8 | -- | -- | -- | -- |
| 172.14 | 0.611 | 2.82 | 0.343 | -- | -1.64 | -- | -- | 0.151 | -- | 1015 | 1234 | -- | -- |
| 174.44 | 0.615 | 2.83 | -- | 0.0225 | -1.38 | -- | -- | 0.119 | 14 | 1014 | 1374 | -- | -- |
| 182.82 | 0.632 | 2.83 | 0.285 | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
| 184.74 | 0.636 | 2.83 | -- | 0.0615 | -- | -- | -- | 0.0857 | 14.8 | -- | -- | -- | -- |
| 174.47 | 0.615 | 2.83 | -- | -- | -1.39 | -- | -- | 0.117 | -- | 1014 | 1383 | -- | -- |
| 184.96 | 0.635 | 2.84 | -- | -- | -- | -- | -- | 0.0844 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.37 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 4 |
| 3 | 164.57 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 4 |
| 6 | 164.96 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 8 | 165.38 | temperature | 30.0 | 10 | < th | dose independent | rect. | 13 | 4 |
| 10 | 165.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 14 | 165.89 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 17 | 166.15 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 28 | 166.59 | radiation | 40.0 | 10 | < th | dose independent | rect. | 13 | 4 |
| 38 | 167.08 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 12 | 3 |
| 60 | 167.19 | humidity | 50.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 61 | 167.19 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 84 | 167.30 | humidity | 50.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 105 | 167.39 | humidity | 50.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 109 | 167.44 | humidity | 50.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 110 | 167.52 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 135 | 167.93 | wind | 5.0 | 30 | < th | dose independent | rect. | 13 | 4 |
| 137 | 168.00 | wind | 9.0 | 30 | < th | dose dependent | rect. | 13 | 4 |
| 138 | 168.03 | humidity | 50.0 | 10 | < th | dose independent | sin | 13 | NA |
| 139 | 168.03 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 3 |
| 141 | 168.04 | humidity | 50.0 | 10 | > th | dose independent | sin | 13 | NA |
| 148 | 168.18 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 4 |
| 175 | 168.29 | radiation | 40.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 210 | 168.51 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 2 | 15 |
| 269 | 168.66 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 4 |
| 271 | 168.66 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 13 | 4 |
| 273 | 168.66 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 4 |
| 274 | 168.66 | temperature | 10.0 | 10 | > th | dose independent | rect. | 17 | 20 |
| 275 | 168.66 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 4 |
| 296 | 168.70 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 337 | 168.77 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 358 | 168.79 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 2 | 7 |
| 359 | 168.80 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 7 |
| 363 | 168.83 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 370 | 168.96 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 5 |
| 397 | 169.15 | radiation | 1.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 401 | 169.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 17 | 20 |
| 468 | 169.25 | atmosphere | 1010.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 525 | 169.35 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 526 | 169.36 | temperature | 15.0 | 720 | > th | dose independent | rect. | 2 | 7 |
| 528 | 169.37 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 7 |
| 531 | 169.38 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 7 |
| 539 | 169.42 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 9 |
| 540 | 169.42 | wind | 9.0 | 30 | < th | dose independent | rect. | 17 | 20 |
| 541 | 169.43 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 2 |
| 543 | 169.43 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 568 | 169.46 | humidity | 80.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 593 | 169.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 4 |
| 600 | 169.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 13 | 2 |
| 603 | 169.54 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 13 | 2 |
| 606 | 169.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 22 |
| 618 | 169.63 | temperature | 15.0 | 720 | > th | dose independent | rect. | 2 | 15 |
| 659 | 169.75 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 17 | 20 |
| 660 | 169.75 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 17 | 20 |
| 673 | 169.80 | wind | 1.0 | 30 | > th | dose independent | rect. | 13 | 4 |
| 689 | 169.86 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 3 |
| 690 | 169.88 | radiation | 30.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 697 | 169.90 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 785 | 170.14 | radiation | 40.0 | 10 | < th | dose independent | rect. | 13 | 15 |
| 817 | 170.24 | radiation | 1.0 | 90 | > th | dose independent | rect. | 12 | 5 |
| 833 | 170.24 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 836 | 170.26 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 857 | 170.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 897 | 170.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 22 |
| 982 | 170.76 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 12 | 3 |