Os01g0863100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0863100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.26 | 0.64 | 6.29 | 0.025 | 0.705 | 0.432 | 0.401 | 1.61 | 0.268 | 3.84 | 80.1 | 29 | -- | -- |
| 196.08 | 0.652 | 6.29 | 0.11 | 0.739 | 0.398 | 1.72 | -- | 0.274 | 3.37 | 78.83 | 8 | -- | -- |
| 185.59 | 0.634 | 6.29 | 0.0153 | 0.703 | 0.436 | -- | 1.76 | 0.265 | 3.89 | 80.21 | 28 | -- | -- |
| 204.98 | 0.667 | 6.29 | 0.0921 | 0.71 | 0.451 | -- | -- | 0.267 | 3.92 | 78.87 | 27 | -- | -- |
| 202.1 | 0.662 | 6.3 | 0.0391 | -- | 0.769 | -- | 1.86 | 0.295 | -- | 79.04 | 22 | -- | -- |
| 204.24 | 0.67 | 6.29 | 0.0803 | 1.12 | -- | 1.8 | -- | 0.277 | 3.04 | -- | -- | -- | -- |
| 214.77 | 0.686 | 6.29 | 0.0413 | 1.14 | -- | -- | -- | 0.266 | 3.25 | -- | -- | -- | -- |
| 220.14 | 0.691 | 6.29 | 0.146 | -- | 0.789 | -- | -- | 0.28 | -- | 78.39 | 26 | -- | -- |
| 205.2 | 0.667 | 6.29 | -- | 0.718 | 0.445 | -- | -- | 0.257 | 3.9 | 78.84 | 27 | -- | -- |
| 287.93 | 0.793 | 6.29 | 0.0896 | -- | -- | -- | -- | 0.296 | -- | -- | -- | -- | -- |
| 214.82 | 0.686 | 6.29 | -- | 1.14 | -- | -- | -- | 0.261 | 3.25 | -- | -- | -- | -- |
| 220.7 | 0.692 | 6.3 | -- | -- | 0.787 | -- | -- | 0.264 | -- | 78.38 | 26 | -- | -- |
| 288.14 | 0.792 | 6.29 | -- | -- | -- | -- | -- | 0.286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.39 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 2 | 176.67 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 15 |
| 4 | 177.90 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 5 | 177.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 9 | 178.61 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 11 | 178.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 12 | 178.92 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 15 | 178.97 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 20 | 179.03 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 24 | 179.14 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 13 |
| 25 | 179.14 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 26 | 179.17 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 29 | 179.21 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 32 | 179.24 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 33 | 179.26 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 41 | 179.32 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 62 | 179.42 | wind | 3.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 65 | 179.45 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 67 | 179.46 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 72 | 179.49 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 113 | 179.77 | humidity | 80.0 | 30 | < th | dose independent | sin | 3 | NA |
| 115 | 179.78 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 127 | 179.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 130 | 179.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 151 | 179.97 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 169 | 180.06 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 9 |
| 200 | 180.15 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 207 | 180.17 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 275 | 180.47 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 298 | 180.57 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 16 |
| 299 | 180.58 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 311 | 180.62 | humidity | 80.0 | 30 | > th | dose independent | sin | 3 | NA |
| 321 | 180.65 | wind | 9.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 324 | 180.66 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 379 | 180.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 383 | 180.83 | wind | 1.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 444 | 181.05 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 505 | 181.20 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 534 | 181.27 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 542 | 181.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 546 | 181.29 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 579 | 181.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 620 | 181.48 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 637 | 181.52 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 21 |
| 640 | 181.52 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 698 | 181.67 | wind | 1.0 | 43200 | < th | dose dependent | sin | 14 | NA |
| 760 | 181.83 | humidity | 80.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 764 | 181.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 806 | 181.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 814 | 181.98 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 860 | 182.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 971 | 182.45 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 997 | 182.51 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 1000 | 182.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 6 |