Os01g0862600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os01g0862600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.42 | 0.473 | 8.54 | -1.26 | 1.25 | -0.00727 | 0.448 | 2.12 | -0.479 | 19.3 | 90.03 | 666 | -- | -- |
| 106.61 | 0.481 | 8.56 | -1 | 1.35 | 0.503 | -0.629 | -- | -0.42 | 19.8 | 77.16 | 983 | -- | -- |
| 101.81 | 0.47 | 8.55 | -1.25 | 1.24 | -0.017 | -- | 1.9 | -0.476 | 19.4 | 90.03 | 666 | -- | -- |
| 108 | 0.484 | 8.56 | -1.03 | 1.38 | 0.477 | -- | -- | -0.435 | 19.7 | 77 | 931 | -- | -- |
| 144.6 | 0.56 | 8.54 | -1.11 | -- | -0.89 | -- | 1.6 | -0.58 | -- | 87.14 | 545 | -- | -- |
| 110.51 | 0.493 | 8.56 | -1.07 | 1.22 | -- | -0.696 | -- | -0.449 | 19.5 | -- | -- | -- | -- |
| 111.82 | 0.495 | 8.56 | -1.06 | 1.22 | -- | -- | -- | -0.45 | 19.4 | -- | -- | -- | -- |
| 152.56 | 0.575 | 8.56 | -0.932 | -- | -0.859 | -- | -- | -0.584 | -- | 87.99 | 479 | -- | -- |
| 135.21 | 0.542 | 8.53 | -- | 1.39 | 0.572 | -- | -- | -0.301 | 19.8 | 76 | 990 | -- | -- |
| 191.14 | 0.646 | 8.53 | -1.08 | -- | -- | -- | -- | -0.47 | -- | -- | -- | -- | -- |
| 141.18 | 0.556 | 8.53 | -- | 1.23 | -- | -- | -- | -0.332 | 19.3 | -- | -- | -- | -- |
| 175.13 | 0.616 | 8.54 | -- | -- | -0.928 | -- | -- | -0.491 | -- | 87.29 | 466 | -- | -- |
| 221.65 | 0.695 | 8.51 | -- | -- | -- | -- | -- | -0.351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.10 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 2 | 95.47 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 3 | 96.01 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 19 |
| 7 | 96.46 | radiation | 30.0 | 10 | < th | dose independent | rect. | 18 | 18 |
| 8 | 96.49 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 9 | 96.51 | radiation | 20.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 12 | 96.54 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 13 | 96.57 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 28 | 96.69 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 5 | 7 |
| 32 | 96.81 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 44 | 96.90 | wind | 9.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 54 | 97.08 | radiation | 1.0 | 30 | < th | dose independent | rect. | 21 | 21 |
| 61 | 97.14 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 66 | 97.19 | humidity | 50.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 73 | 97.33 | radiation | 1.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 74 | 97.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 21 | 21 |
| 87 | 97.58 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 92 | 97.62 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 95 | 97.67 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 101 | 97.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 105 | 97.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 106 | 97.76 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 107 | 97.77 | humidity | 90.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 110 | 97.80 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 115 | 97.83 | radiation | 1.0 | 30 | < th | dose independent | sin | 3 | NA |
| 117 | 97.84 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 8 |
| 119 | 97.85 | humidity | 80.0 | 270 | > th | dose independent | rect. | 7 | 4 |
| 124 | 97.86 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 131 | 97.90 | wind | 9.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 138 | 97.92 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 140 | 97.92 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 153 | 97.98 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 160 | 98.01 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 186 | 98.06 | humidity | 80.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 218 | 98.16 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 228 | 98.21 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 232 | 98.23 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 239 | 98.25 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 250 | 98.29 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 269 | 98.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 270 | 98.34 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 275 | 98.36 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 7 |
| 279 | 98.37 | humidity | 50.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 304 | 98.47 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 321 | 98.54 | radiation | 1.0 | 30 | > th | dose independent | sin | 5 | NA |
| 322 | 98.54 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 331 | 98.56 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 1 | 17 |
| 332 | 98.57 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 351 | 98.63 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 355 | 98.65 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 7 |
| 360 | 98.65 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 7 |
| 363 | 98.66 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 366 | 98.66 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 7 |
| 367 | 98.66 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 17 |
| 368 | 98.66 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 15 |
| 382 | 98.71 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 17 |
| 404 | 98.78 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 17 |
| 406 | 98.78 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 17 | 19 |
| 430 | 98.87 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 438 | 98.88 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 446 | 98.89 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 17 |
| 448 | 98.89 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 17 |
| 449 | 98.90 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 470 | 98.93 | humidity | 90.0 | 720 | > th | dose independent | sin | 2 | NA |
| 479 | 98.94 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 482 | 98.95 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 501 | 98.97 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 513 | 98.99 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 18 | 18 |
| 521 | 99.01 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 527 | 99.02 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 528 | 99.02 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 7 | 20 |
| 536 | 99.03 | wind | 9.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 554 | 99.05 | wind | 1.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 558 | 99.06 | humidity | 90.0 | 270 | > th | dose independent | sin | 23 | NA |
| 580 | 99.09 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 581 | 99.09 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 598 | 99.10 | temperature | 15.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 612 | 99.12 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 624 | 99.14 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 7 |
| 632 | 99.14 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 653 | 99.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 672 | 99.22 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 691 | 99.25 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 695 | 99.26 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 7 |
| 706 | 99.27 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 20 |
| 718 | 99.28 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 12 | 17 |
| 720 | 99.28 | temperature | 20.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 726 | 99.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 730 | 99.29 | humidity | 90.0 | 720 | > th | dose independent | rect. | 1 | 19 |
| 733 | 99.29 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 776 | 99.34 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 784 | 99.35 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 20 |
| 801 | 99.37 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 16 |
| 811 | 99.39 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 14 |
| 818 | 99.40 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 18 |
| 827 | 99.41 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 21 |
| 828 | 99.41 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 829 | 99.41 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 10 | 3 |
| 850 | 99.43 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 16 |
| 852 | 99.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 861 | 99.44 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 862 | 99.44 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 873 | 99.45 | wind | 9.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 879 | 99.46 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 18 |
| 918 | 99.50 | wind | 9.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 934 | 99.51 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 947 | 99.53 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 15 | 21 |
| 981 | 99.57 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 2 |