Os01g0862400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0862400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.87 | 0.495 | 7.14 | -0.556 | 2.25 | 0.442 | -2.18 | 1.09 | -0.462 | 17.7 | 7.848 | 16 | -- | -- |
| 115.78 | 0.501 | 7.13 | -0.546 | 2.26 | 0.713 | -2.41 | -- | -0.442 | 17.1 | 6.934 | 14 | -- | -- |
| 121.8 | 0.514 | 7.14 | -0.561 | 2.27 | 0.448 | -- | 1.15 | -0.469 | 17.7 | 7.847 | 36 | -- | -- |
| 129.25 | 0.533 | 7.15 | -0.55 | 2.21 | 0.486 | -- | -- | -0.486 | 17.6 | 7.103 | 15 | -- | -- |
| 376.91 | 0.909 | 7.11 | -0.61 | -- | 0.474 | -- | 0.817 | -0.534 | -- | 5.82 | 12 | -- | -- |
| 126.6 | 0.527 | 7.16 | -0.572 | 2.29 | -- | -1.72 | -- | -0.494 | 18.4 | -- | -- | -- | -- |
| 133.45 | 0.541 | 7.16 | -0.553 | 2.28 | -- | -- | -- | -0.501 | 18.6 | -- | -- | -- | -- |
| 379.65 | 0.911 | 7.11 | -0.611 | -- | 0.481 | -- | -- | -0.527 | -- | 5.23 | 3 | -- | -- |
| 137.23 | 0.549 | 7.13 | -- | 2.21 | 0.491 | -- | -- | -0.424 | 17.6 | 7.103 | 15 | -- | -- |
| 404.18 | 0.939 | 7.12 | -0.608 | -- | -- | -- | -- | -0.548 | -- | -- | -- | -- | -- |
| 141.5 | 0.556 | 7.15 | -- | 2.29 | -- | -- | -- | -0.44 | 18.6 | -- | -- | -- | -- |
| 389.5 | 0.922 | 7.1 | -- | -- | 0.48 | -- | -- | -0.46 | -- | 5.23 | 2 | -- | -- |
| 413.93 | 0.95 | 7.1 | -- | -- | -- | -- | -- | -0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.04 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 4 | 98.59 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 32 | 103.35 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 20 |
| 44 | 104.08 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 20 |
| 50 | 104.24 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 55 | 104.45 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 18 |
| 70 | 104.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 72 | 104.83 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 82 | 104.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 83 | 105.04 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 15 |
| 98 | 105.26 | wind | 5.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 104 | 105.40 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 10 |
| 113 | 105.48 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 15 |
| 128 | 105.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 131 | 105.80 | radiation | 1.0 | 90 | < th | dose independent | rect. | 22 | 9 |
| 136 | 105.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 9 |
| 138 | 105.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 155 | 106.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 158 | 106.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 161 | 106.06 | temperature | 15.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 162 | 106.08 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 7 |
| 167 | 106.09 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 175 | 106.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 176 | 106.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 177 | 106.12 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 178 | 106.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 15 |
| 181 | 106.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 184 | 106.17 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 23 | 6 |
| 188 | 106.19 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 17 | 15 |
| 189 | 106.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 196 | 106.31 | temperature | 15.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 197 | 106.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 15 |
| 199 | 106.35 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 203 | 106.39 | radiation | 1.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 206 | 106.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 208 | 106.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 209 | 106.43 | radiation | 20.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 210 | 106.43 | radiation | 30.0 | 10 | < th | dose independent | rect. | 18 | 17 |
| 215 | 106.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 227 | 106.63 | temperature | 15.0 | 10 | > th | dose independent | rect. | 17 | 7 |
| 230 | 106.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 233 | 106.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 242 | 106.71 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 243 | 106.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 255 | 106.79 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 18 | 17 |
| 279 | 106.93 | wind | 3.0 | 30 | > th | dose independent | rect. | 7 | 11 |
| 282 | 106.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 292 | 107.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 15 |
| 294 | 107.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 304 | 107.09 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 17 |
| 305 | 107.09 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 306 | 107.10 | radiation | 1.0 | 90 | < th | dose independent | sin | 9 | NA |
| 310 | 107.11 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 331 | 107.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 15 |
| 333 | 107.25 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 18 | 17 |
| 338 | 107.30 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 348 | 107.32 | wind | 7.0 | 10 | < th | dose independent | rect. | 6 | 17 |
| 354 | 107.37 | humidity | 50.0 | 90 | > th | dose independent | rect. | 11 | 7 |
| 379 | 107.44 | wind | 3.0 | 30 | > th | dose independent | rect. | 3 | 15 |
| 381 | 107.44 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 382 | 107.44 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 23 | 7 |
| 407 | 107.54 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 420 | 107.59 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 427 | 107.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 18 |
| 428 | 107.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 429 | 107.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 430 | 107.64 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 22 | 7 |
| 433 | 107.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 449 | 107.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 464 | 107.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 7 |
| 472 | 107.78 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 18 |
| 481 | 107.81 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 488 | 107.85 | humidity | 80.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 489 | 107.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 493 | 107.86 | wind | 9.0 | 30 | < th | dose dependent | rect. | 18 | 17 |
| 517 | 107.93 | wind | 9.0 | 90 | < th | dose independent | rect. | 22 | 7 |
| 518 | 107.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 519 | 107.93 | temperature | 30.0 | 90 | < th | dose independent | rect. | 22 | 7 |
| 520 | 107.93 | humidity | 50.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 523 | 107.93 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 524 | 107.93 | radiation | 20.0 | 90 | < th | dose independent | rect. | 22 | 7 |
| 527 | 107.93 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 544 | 107.97 | radiation | 1.0 | 30 | > th | dose independent | sin | 4 | NA |
| 552 | 107.98 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 560 | 108.00 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 22 | 7 |
| 564 | 108.00 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 22 | 7 |
| 571 | 108.02 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 573 | 108.03 | wind | 9.0 | 90 | < th | dose dependent | rect. | 22 | 7 |
| 613 | 108.13 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 655 | 108.24 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 674 | 108.29 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 17 | 7 |
| 679 | 108.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 703 | 108.37 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 706 | 108.38 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 17 |
| 707 | 108.38 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 711 | 108.39 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 7 |
| 715 | 108.41 | temperature | 15.0 | 90 | > th | dose independent | rect. | 11 | 6 |
| 727 | 108.43 | wind | 7.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 728 | 108.43 | humidity | 60.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 780 | 108.48 | radiation | 10.0 | 90 | < th | dose independent | sin | 17 | NA |
| 781 | 108.48 | wind | 1.0 | 90 | > th | dose independent | rect. | 11 | 6 |
| 816 | 108.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 18 |
| 817 | 108.57 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 18 |
| 821 | 108.57 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 833 | 108.60 | temperature | 30.0 | 10 | < th | dose independent | rect. | 8 | 10 |
| 850 | 108.63 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 868 | 108.68 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 6 |
| 872 | 108.68 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 17 |
| 873 | 108.68 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 6 |
| 878 | 108.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 8 |
| 880 | 108.70 | temperature | 15.0 | 10 | > th | dose independent | rect. | 17 | 9 |
| 892 | 108.72 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 893 | 108.72 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 17 |
| 904 | 108.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 7 |
| 908 | 108.75 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 11 | 6 |
| 914 | 108.76 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 943 | 108.80 | temperature | 10.0 | 10 | > th | dose dependent | sin | 21 | NA |